Description of Collinsella avium sp. nov., a new member of the Collinsella genus isolated from the ceacum of feral chicken

An obligately anaerobic, non-motile and Gram-positive rod bacterium, strain SW219 was isolated from ceacum of feral chickens. Based on 16S rRNA sequence analysis, the strain SW219 exhibited 97.88% similarity to Collinsella massiliensis strain GD3 strain, the closest valid species. The genome size of...

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Autores principales: Wongkuna, S., Ghimire, S., Chankhamhaengdecha, S., Janvilisri, T., Scaria, J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2021
Materias:
Taxonogenomics: Genome of a New Organism
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8207210/
https://www.ncbi.nlm.nih.gov/pubmed/34168883
http://dx.doi.org/10.1016/j.nmni.2021.100902
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author Wongkuna, S.
Ghimire, S.
Chankhamhaengdecha, S.
Janvilisri, T.
Scaria, J.
author_facet Wongkuna, S.
Ghimire, S.
Chankhamhaengdecha, S.
Janvilisri, T.
Scaria, J.
author_sort Wongkuna, S.
collection PubMed
description An obligately anaerobic, non-motile and Gram-positive rod bacterium, strain SW219 was isolated from ceacum of feral chickens. Based on 16S rRNA sequence analysis, the strain SW219 exhibited 97.88% similarity to Collinsella massiliensis strain GD3 strain, the closest valid species. The genome size of SW219 was 2.58 Mbp with 64.5 mol% of G+C content. The phenotypic and genotypic analysis suggested that the strain SW219 is a new species belonging to the family Coriobacteriaceae within the Actinobacteria phylum, which the name Collinsella avium sp. nov. is proposed. The type strain of Collinsella avium is SW219 (= DSM 109235(T) and = CCOS 1884(T)).
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spelling pubmed-82072102021-06-23 Description of Collinsella avium sp. nov., a new member of the Collinsella genus isolated from the ceacum of feral chicken Wongkuna, S. Ghimire, S. Chankhamhaengdecha, S. Janvilisri, T. Scaria, J. New Microbes New Infect Taxonogenomics: Genome of a New Organism An obligately anaerobic, non-motile and Gram-positive rod bacterium, strain SW219 was isolated from ceacum of feral chickens. Based on 16S rRNA sequence analysis, the strain SW219 exhibited 97.88% similarity to Collinsella massiliensis strain GD3 strain, the closest valid species. The genome size of SW219 was 2.58 Mbp with 64.5 mol% of G+C content. The phenotypic and genotypic analysis suggested that the strain SW219 is a new species belonging to the family Coriobacteriaceae within the Actinobacteria phylum, which the name Collinsella avium sp. nov. is proposed. The type strain of Collinsella avium is SW219 (= DSM 109235(T) and = CCOS 1884(T)). Elsevier 2021-05-18 /pmc/articles/PMC8207210/ /pubmed/34168883 http://dx.doi.org/10.1016/j.nmni.2021.100902 Text en © 2021 The Author(s) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Taxonogenomics: Genome of a New Organism
Wongkuna, S.
Ghimire, S.
Chankhamhaengdecha, S.
Janvilisri, T.
Scaria, J.
Description of Collinsella avium sp. nov., a new member of the Collinsella genus isolated from the ceacum of feral chicken
title Description of Collinsella avium sp. nov., a new member of the Collinsella genus isolated from the ceacum of feral chicken
title_full Description of Collinsella avium sp. nov., a new member of the Collinsella genus isolated from the ceacum of feral chicken
title_fullStr Description of Collinsella avium sp. nov., a new member of the Collinsella genus isolated from the ceacum of feral chicken
title_full_unstemmed Description of Collinsella avium sp. nov., a new member of the Collinsella genus isolated from the ceacum of feral chicken
title_short Description of Collinsella avium sp. nov., a new member of the Collinsella genus isolated from the ceacum of feral chicken
title_sort description of collinsella avium sp. nov., a new member of the collinsella genus isolated from the ceacum of feral chicken
topic Taxonogenomics: Genome of a New Organism
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8207210/
https://www.ncbi.nlm.nih.gov/pubmed/34168883
http://dx.doi.org/10.1016/j.nmni.2021.100902
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