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Colonization with selected antibiotic resistant bacteria among a cohort of Sri Lankan university students

BACKGROUND: Antibiotic Resistance is an imminent global public health threat. Antibiotic resistance emerged in healthcare settings and has now moved on to the community settings. This study was conducted to identify the rates of asymptomatic colonization with selected antibiotic resistant organisms,...

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Autores principales: Munasinghe, Thilini, Vidanapathirana, Gihani, Kuthubdeen, Shahlina, Ekanayake, Asela, Angulmaduwa, Sacheera, De Silva, Kunchana, Subhasinghe, Susan, Kalupahana, Ruwani, Liyanapathirana, Veranja, Ip, Margaret
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8207576/
https://www.ncbi.nlm.nih.gov/pubmed/34130629
http://dx.doi.org/10.1186/s12879-021-06289-z
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author Munasinghe, Thilini
Vidanapathirana, Gihani
Kuthubdeen, Shahlina
Ekanayake, Asela
Angulmaduwa, Sacheera
De Silva, Kunchana
Subhasinghe, Susan
Kalupahana, Ruwani
Liyanapathirana, Veranja
Ip, Margaret
author_facet Munasinghe, Thilini
Vidanapathirana, Gihani
Kuthubdeen, Shahlina
Ekanayake, Asela
Angulmaduwa, Sacheera
De Silva, Kunchana
Subhasinghe, Susan
Kalupahana, Ruwani
Liyanapathirana, Veranja
Ip, Margaret
author_sort Munasinghe, Thilini
collection PubMed
description BACKGROUND: Antibiotic Resistance is an imminent global public health threat. Antibiotic resistance emerged in healthcare settings and has now moved on to the community settings. This study was conducted to identify the rates of asymptomatic colonization with selected antibiotic resistant organisms, (Methicillin Resistant Staphylococcus aureus (MRSA), Extended Spectrum Beta Lactamase (ESBL) producing Escherichia coli and Klebsiella spp and carbapenem resistant E.coli and Klebsiella spp) - among a group of university students in Sri Lanka. Identification of genetic determinants of MRSA and ESBL was an additional objective of the study. METHODS: A self - collected nasal swab and a peri-rectal swab collected after passing stools were obtained. Routine microbiological methods were used for the isolation S.aureus from the nasal swab and E.coli and Klebsiella species from the peri-rectal swab. Antibiotic sensitivity testing was performed as recommended by clinical and laboratory standard institute (CLSI). Three (3) genes that are responsible for ESBL production; bla(CTX-M), bla(SHV), and bla(TEM) were tested using previously described primers and PCR procedures. Identification of MecA and PVL genes attributed to MRSA was also done with PCR. RESULTS: A total of 322 participants between 21 and 28 years were recruited representing 5 different faculties of study. Seventy one (22.0%) were colonized with S.aureus and 14 among them with MRSA, making the MRSA colonization rate of 4.3%. Forty five (15%) of the participants were colonized with an ESBL producing E.coli or Klebsiella spp. No one was colonized with carbapenem resistant E.coli or Klebsiella species. Of the 45 ESBL producers the commonest genetic determinant identified was bla(CTX-M) (n = 36), while 16 isolates had bla(TEM) and 7 had bla(SHV.) Similarly, of the 14 isolates identified as MRSA, 3 (21.4%) were found to be PVL positive while 11 (78.6%) were MecA positive. CONCLUSIONS: A high rate of colonization with ESBL producing E.coli and Klebsiella species was noted in our study group.
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spelling pubmed-82075762021-06-16 Colonization with selected antibiotic resistant bacteria among a cohort of Sri Lankan university students Munasinghe, Thilini Vidanapathirana, Gihani Kuthubdeen, Shahlina Ekanayake, Asela Angulmaduwa, Sacheera De Silva, Kunchana Subhasinghe, Susan Kalupahana, Ruwani Liyanapathirana, Veranja Ip, Margaret BMC Infect Dis Research Article BACKGROUND: Antibiotic Resistance is an imminent global public health threat. Antibiotic resistance emerged in healthcare settings and has now moved on to the community settings. This study was conducted to identify the rates of asymptomatic colonization with selected antibiotic resistant organisms, (Methicillin Resistant Staphylococcus aureus (MRSA), Extended Spectrum Beta Lactamase (ESBL) producing Escherichia coli and Klebsiella spp and carbapenem resistant E.coli and Klebsiella spp) - among a group of university students in Sri Lanka. Identification of genetic determinants of MRSA and ESBL was an additional objective of the study. METHODS: A self - collected nasal swab and a peri-rectal swab collected after passing stools were obtained. Routine microbiological methods were used for the isolation S.aureus from the nasal swab and E.coli and Klebsiella species from the peri-rectal swab. Antibiotic sensitivity testing was performed as recommended by clinical and laboratory standard institute (CLSI). Three (3) genes that are responsible for ESBL production; bla(CTX-M), bla(SHV), and bla(TEM) were tested using previously described primers and PCR procedures. Identification of MecA and PVL genes attributed to MRSA was also done with PCR. RESULTS: A total of 322 participants between 21 and 28 years were recruited representing 5 different faculties of study. Seventy one (22.0%) were colonized with S.aureus and 14 among them with MRSA, making the MRSA colonization rate of 4.3%. Forty five (15%) of the participants were colonized with an ESBL producing E.coli or Klebsiella spp. No one was colonized with carbapenem resistant E.coli or Klebsiella species. Of the 45 ESBL producers the commonest genetic determinant identified was bla(CTX-M) (n = 36), while 16 isolates had bla(TEM) and 7 had bla(SHV.) Similarly, of the 14 isolates identified as MRSA, 3 (21.4%) were found to be PVL positive while 11 (78.6%) were MecA positive. CONCLUSIONS: A high rate of colonization with ESBL producing E.coli and Klebsiella species was noted in our study group. BioMed Central 2021-06-15 /pmc/articles/PMC8207576/ /pubmed/34130629 http://dx.doi.org/10.1186/s12879-021-06289-z Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research Article
Munasinghe, Thilini
Vidanapathirana, Gihani
Kuthubdeen, Shahlina
Ekanayake, Asela
Angulmaduwa, Sacheera
De Silva, Kunchana
Subhasinghe, Susan
Kalupahana, Ruwani
Liyanapathirana, Veranja
Ip, Margaret
Colonization with selected antibiotic resistant bacteria among a cohort of Sri Lankan university students
title Colonization with selected antibiotic resistant bacteria among a cohort of Sri Lankan university students
title_full Colonization with selected antibiotic resistant bacteria among a cohort of Sri Lankan university students
title_fullStr Colonization with selected antibiotic resistant bacteria among a cohort of Sri Lankan university students
title_full_unstemmed Colonization with selected antibiotic resistant bacteria among a cohort of Sri Lankan university students
title_short Colonization with selected antibiotic resistant bacteria among a cohort of Sri Lankan university students
title_sort colonization with selected antibiotic resistant bacteria among a cohort of sri lankan university students
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8207576/
https://www.ncbi.nlm.nih.gov/pubmed/34130629
http://dx.doi.org/10.1186/s12879-021-06289-z
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