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On the quasi-steady-state approximation in an open Michaelis–Menten reaction mechanism

The conditions for the validity of the standard quasi-steady-state approximation in the Michaelis–Menten mechanism in a closed reaction vessel have been well studied, but much less so the conditions for the validity of this approximation for the system with substrate inflow. We analyze quasi-steady-...

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Autores principales: Eilertsen, Justin, Roussel, Marc R., Schnell, Santiago, Walcher, Sebastian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8208640/
https://www.ncbi.nlm.nih.gov/pubmed/34142000
http://dx.doi.org/10.3934/math.2021398
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author Eilertsen, Justin
Roussel, Marc R.
Schnell, Santiago
Walcher, Sebastian
author_facet Eilertsen, Justin
Roussel, Marc R.
Schnell, Santiago
Walcher, Sebastian
author_sort Eilertsen, Justin
collection PubMed
description The conditions for the validity of the standard quasi-steady-state approximation in the Michaelis–Menten mechanism in a closed reaction vessel have been well studied, but much less so the conditions for the validity of this approximation for the system with substrate inflow. We analyze quasi-steady-state scenarios for the open system attributable to singular perturbations, as well as less restrictive conditions. For both settings we obtain distinguished invariant manifolds and time scale estimates, and we highlight the special role of singular perturbation parameters in higher order approximations of slow manifolds. We close the paper with a discussion of distinguished invariant manifolds in the global phase portrait.
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spelling pubmed-82086402021-06-16 On the quasi-steady-state approximation in an open Michaelis–Menten reaction mechanism Eilertsen, Justin Roussel, Marc R. Schnell, Santiago Walcher, Sebastian AIMS Math Article The conditions for the validity of the standard quasi-steady-state approximation in the Michaelis–Menten mechanism in a closed reaction vessel have been well studied, but much less so the conditions for the validity of this approximation for the system with substrate inflow. We analyze quasi-steady-state scenarios for the open system attributable to singular perturbations, as well as less restrictive conditions. For both settings we obtain distinguished invariant manifolds and time scale estimates, and we highlight the special role of singular perturbation parameters in higher order approximations of slow manifolds. We close the paper with a discussion of distinguished invariant manifolds in the global phase portrait. 2021-04-21 2021 /pmc/articles/PMC8208640/ /pubmed/34142000 http://dx.doi.org/10.3934/math.2021398 Text en https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0 (https://creativecommons.org/licenses/by/4.0/) )
spellingShingle Article
Eilertsen, Justin
Roussel, Marc R.
Schnell, Santiago
Walcher, Sebastian
On the quasi-steady-state approximation in an open Michaelis–Menten reaction mechanism
title On the quasi-steady-state approximation in an open Michaelis–Menten reaction mechanism
title_full On the quasi-steady-state approximation in an open Michaelis–Menten reaction mechanism
title_fullStr On the quasi-steady-state approximation in an open Michaelis–Menten reaction mechanism
title_full_unstemmed On the quasi-steady-state approximation in an open Michaelis–Menten reaction mechanism
title_short On the quasi-steady-state approximation in an open Michaelis–Menten reaction mechanism
title_sort on the quasi-steady-state approximation in an open michaelis–menten reaction mechanism
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8208640/
https://www.ncbi.nlm.nih.gov/pubmed/34142000
http://dx.doi.org/10.3934/math.2021398
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