Cargando…

A teaching tool about the fickle p value and other statistical principles based on real-life data

A poor understanding of statistical analysis has been proposed as a key reason for lack of replicability of many studies in experimental biomedicine. While several authors have demonstrated the fickleness of calculated p values based on simulations, we have experienced that such simulations are diff...

Descripción completa

Detalles Bibliográficos
Autores principales: Alawbathani, Salem, Batool, Mehreen, Fleckhaus, Jan, Hamad, Sarkawt, Hassenrück, Floyd, Hou, Yanhong, Li, Xia, Salmanton-García, Jon, Ullah, Sami, Wieters, Frederique, Michel, Martin C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Berlin Heidelberg 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8208928/
https://www.ncbi.nlm.nih.gov/pubmed/33443615
http://dx.doi.org/10.1007/s00210-020-02045-3
_version_ 1783709022101176320
author Alawbathani, Salem
Batool, Mehreen
Fleckhaus, Jan
Hamad, Sarkawt
Hassenrück, Floyd
Hou, Yanhong
Li, Xia
Salmanton-García, Jon
Ullah, Sami
Wieters, Frederique
Michel, Martin C.
author_facet Alawbathani, Salem
Batool, Mehreen
Fleckhaus, Jan
Hamad, Sarkawt
Hassenrück, Floyd
Hou, Yanhong
Li, Xia
Salmanton-García, Jon
Ullah, Sami
Wieters, Frederique
Michel, Martin C.
author_sort Alawbathani, Salem
collection PubMed
description A poor understanding of statistical analysis has been proposed as a key reason for lack of replicability of many studies in experimental biomedicine. While several authors have demonstrated the fickleness of calculated p values based on simulations, we have experienced that such simulations are difficult to understand for many biomedical scientists and often do not lead to a sound understanding of the role of variability between random samples in statistical analysis. Therefore, we as trainees and trainers in a course of statistics for biomedical scientists have used real data from a large published study to develop a tool that allows scientists to directly experience the fickleness of p values. A tool based on a commonly used software package was developed that allows using random samples from real data. The tool is described and together with the underlying database is made available. The tool has been tested successfully in multiple other groups of biomedical scientists. It can also let trainees experience the impact of randomness, sample sizes and choice of specific statistical test on measured p values. We propose that live exercises based on real data will be more impactful in the training of biomedical scientists on statistical concepts. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s00210-020-02045-3.
format Online
Article
Text
id pubmed-8208928
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Springer Berlin Heidelberg
record_format MEDLINE/PubMed
spelling pubmed-82089282021-07-01 A teaching tool about the fickle p value and other statistical principles based on real-life data Alawbathani, Salem Batool, Mehreen Fleckhaus, Jan Hamad, Sarkawt Hassenrück, Floyd Hou, Yanhong Li, Xia Salmanton-García, Jon Ullah, Sami Wieters, Frederique Michel, Martin C. Naunyn Schmiedebergs Arch Pharmacol Brief Communication A poor understanding of statistical analysis has been proposed as a key reason for lack of replicability of many studies in experimental biomedicine. While several authors have demonstrated the fickleness of calculated p values based on simulations, we have experienced that such simulations are difficult to understand for many biomedical scientists and often do not lead to a sound understanding of the role of variability between random samples in statistical analysis. Therefore, we as trainees and trainers in a course of statistics for biomedical scientists have used real data from a large published study to develop a tool that allows scientists to directly experience the fickleness of p values. A tool based on a commonly used software package was developed that allows using random samples from real data. The tool is described and together with the underlying database is made available. The tool has been tested successfully in multiple other groups of biomedical scientists. It can also let trainees experience the impact of randomness, sample sizes and choice of specific statistical test on measured p values. We propose that live exercises based on real data will be more impactful in the training of biomedical scientists on statistical concepts. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s00210-020-02045-3. Springer Berlin Heidelberg 2021-01-14 2021 /pmc/articles/PMC8208928/ /pubmed/33443615 http://dx.doi.org/10.1007/s00210-020-02045-3 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Brief Communication
Alawbathani, Salem
Batool, Mehreen
Fleckhaus, Jan
Hamad, Sarkawt
Hassenrück, Floyd
Hou, Yanhong
Li, Xia
Salmanton-García, Jon
Ullah, Sami
Wieters, Frederique
Michel, Martin C.
A teaching tool about the fickle p value and other statistical principles based on real-life data
title A teaching tool about the fickle p value and other statistical principles based on real-life data
title_full A teaching tool about the fickle p value and other statistical principles based on real-life data
title_fullStr A teaching tool about the fickle p value and other statistical principles based on real-life data
title_full_unstemmed A teaching tool about the fickle p value and other statistical principles based on real-life data
title_short A teaching tool about the fickle p value and other statistical principles based on real-life data
title_sort teaching tool about the fickle p value and other statistical principles based on real-life data
topic Brief Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8208928/
https://www.ncbi.nlm.nih.gov/pubmed/33443615
http://dx.doi.org/10.1007/s00210-020-02045-3
work_keys_str_mv AT alawbathanisalem ateachingtoolabouttheficklepvalueandotherstatisticalprinciplesbasedonreallifedata
AT batoolmehreen ateachingtoolabouttheficklepvalueandotherstatisticalprinciplesbasedonreallifedata
AT fleckhausjan ateachingtoolabouttheficklepvalueandotherstatisticalprinciplesbasedonreallifedata
AT hamadsarkawt ateachingtoolabouttheficklepvalueandotherstatisticalprinciplesbasedonreallifedata
AT hassenruckfloyd ateachingtoolabouttheficklepvalueandotherstatisticalprinciplesbasedonreallifedata
AT houyanhong ateachingtoolabouttheficklepvalueandotherstatisticalprinciplesbasedonreallifedata
AT lixia ateachingtoolabouttheficklepvalueandotherstatisticalprinciplesbasedonreallifedata
AT salmantongarciajon ateachingtoolabouttheficklepvalueandotherstatisticalprinciplesbasedonreallifedata
AT ullahsami ateachingtoolabouttheficklepvalueandotherstatisticalprinciplesbasedonreallifedata
AT wietersfrederique ateachingtoolabouttheficklepvalueandotherstatisticalprinciplesbasedonreallifedata
AT michelmartinc ateachingtoolabouttheficklepvalueandotherstatisticalprinciplesbasedonreallifedata
AT alawbathanisalem teachingtoolabouttheficklepvalueandotherstatisticalprinciplesbasedonreallifedata
AT batoolmehreen teachingtoolabouttheficklepvalueandotherstatisticalprinciplesbasedonreallifedata
AT fleckhausjan teachingtoolabouttheficklepvalueandotherstatisticalprinciplesbasedonreallifedata
AT hamadsarkawt teachingtoolabouttheficklepvalueandotherstatisticalprinciplesbasedonreallifedata
AT hassenruckfloyd teachingtoolabouttheficklepvalueandotherstatisticalprinciplesbasedonreallifedata
AT houyanhong teachingtoolabouttheficklepvalueandotherstatisticalprinciplesbasedonreallifedata
AT lixia teachingtoolabouttheficklepvalueandotherstatisticalprinciplesbasedonreallifedata
AT salmantongarciajon teachingtoolabouttheficklepvalueandotherstatisticalprinciplesbasedonreallifedata
AT ullahsami teachingtoolabouttheficklepvalueandotherstatisticalprinciplesbasedonreallifedata
AT wietersfrederique teachingtoolabouttheficklepvalueandotherstatisticalprinciplesbasedonreallifedata
AT michelmartinc teachingtoolabouttheficklepvalueandotherstatisticalprinciplesbasedonreallifedata