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Direct detection of ESKAPEc pathogens from whole blood using the T2Bacteria Panel allows early antimicrobial stewardship intervention in patients with sepsis

In the microbiological diagnosis of bloodstream infections (BSI), blood culture (BC) is considered the gold standard test despite its limitations such as low sensitivity and slow turnaround time. A new FDA‐cleared and CE‐marked platform utilizing magnetic resonance to detect amplified DNA of the six...

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Autores principales: Drevinek, Pavel, Hurych, Jakub, Antuskova, Milena, Tkadlec, Jan, Berousek, Jan, Prikrylova, Zuzana, Bures, Jiri, Vajter, Jaromir, Soucek, Martin, Masopust, Jan, Martinkova, Vendula, Adamkova, Jaroslava, Hysperska, Veronika, Bebrova, Eliska
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8209282/
https://www.ncbi.nlm.nih.gov/pubmed/34180598
http://dx.doi.org/10.1002/mbo3.1210
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author Drevinek, Pavel
Hurych, Jakub
Antuskova, Milena
Tkadlec, Jan
Berousek, Jan
Prikrylova, Zuzana
Bures, Jiri
Vajter, Jaromir
Soucek, Martin
Masopust, Jan
Martinkova, Vendula
Adamkova, Jaroslava
Hysperska, Veronika
Bebrova, Eliska
author_facet Drevinek, Pavel
Hurych, Jakub
Antuskova, Milena
Tkadlec, Jan
Berousek, Jan
Prikrylova, Zuzana
Bures, Jiri
Vajter, Jaromir
Soucek, Martin
Masopust, Jan
Martinkova, Vendula
Adamkova, Jaroslava
Hysperska, Veronika
Bebrova, Eliska
author_sort Drevinek, Pavel
collection PubMed
description In the microbiological diagnosis of bloodstream infections (BSI), blood culture (BC) is considered the gold standard test despite its limitations such as low sensitivity and slow turnaround time. A new FDA‐cleared and CE‐marked platform utilizing magnetic resonance to detect amplified DNA of the six most common and/or problematic BSI pathogens (Enterococcus faecium, Staphylococcus aureus, Klebsiella pneumoniae, Acinetobacter baumannii, Pseudomonas aeruginosa, and Escherichia coli; referred to as ESKAPEc) is available and may shorten the time to diagnosis and potentially improve antimicrobial utilization. Whole blood samples from hospitalized patients with clinical signs of sepsis were analyzed using the T2Bacteria Panel (T2Biosystems) and compared to simultaneously collected BC. Discrepant results were evaluated based on clinical infection criteria, combining supporting culture results and the opinion of treating physicians. A total of 55 samples from 53 patients were evaluated. The sensitivity and specificity of the T2Bacteria panel was 94% (16 out of 17 detections of T2Bacteria‐targeted organisms) and 100%, respectively, with 36.4% (8 of 22) causes of BSI detected only by this method. The T2Bacteria Panel detected pathogens on average 55 hours faster than standard BC. In our study, 9 of 15 patients with positive T2Bacteria Panel results received early‐targeted antibiotic therapy and/or modification of antimicrobial treatment based on T2Bacteria Panel findings. Given the high reliability, faster time to detection, and easy workflow, the technique qualifies as a point‐of‐care testing approach.
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spelling pubmed-82092822021-06-25 Direct detection of ESKAPEc pathogens from whole blood using the T2Bacteria Panel allows early antimicrobial stewardship intervention in patients with sepsis Drevinek, Pavel Hurych, Jakub Antuskova, Milena Tkadlec, Jan Berousek, Jan Prikrylova, Zuzana Bures, Jiri Vajter, Jaromir Soucek, Martin Masopust, Jan Martinkova, Vendula Adamkova, Jaroslava Hysperska, Veronika Bebrova, Eliska Microbiologyopen Original Articles In the microbiological diagnosis of bloodstream infections (BSI), blood culture (BC) is considered the gold standard test despite its limitations such as low sensitivity and slow turnaround time. A new FDA‐cleared and CE‐marked platform utilizing magnetic resonance to detect amplified DNA of the six most common and/or problematic BSI pathogens (Enterococcus faecium, Staphylococcus aureus, Klebsiella pneumoniae, Acinetobacter baumannii, Pseudomonas aeruginosa, and Escherichia coli; referred to as ESKAPEc) is available and may shorten the time to diagnosis and potentially improve antimicrobial utilization. Whole blood samples from hospitalized patients with clinical signs of sepsis were analyzed using the T2Bacteria Panel (T2Biosystems) and compared to simultaneously collected BC. Discrepant results were evaluated based on clinical infection criteria, combining supporting culture results and the opinion of treating physicians. A total of 55 samples from 53 patients were evaluated. The sensitivity and specificity of the T2Bacteria panel was 94% (16 out of 17 detections of T2Bacteria‐targeted organisms) and 100%, respectively, with 36.4% (8 of 22) causes of BSI detected only by this method. The T2Bacteria Panel detected pathogens on average 55 hours faster than standard BC. In our study, 9 of 15 patients with positive T2Bacteria Panel results received early‐targeted antibiotic therapy and/or modification of antimicrobial treatment based on T2Bacteria Panel findings. Given the high reliability, faster time to detection, and easy workflow, the technique qualifies as a point‐of‐care testing approach. John Wiley and Sons Inc. 2021-06-16 /pmc/articles/PMC8209282/ /pubmed/34180598 http://dx.doi.org/10.1002/mbo3.1210 Text en © 2021 The Authors. MicrobiologyOpen published by John Wiley & Sons Ltd. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.
spellingShingle Original Articles
Drevinek, Pavel
Hurych, Jakub
Antuskova, Milena
Tkadlec, Jan
Berousek, Jan
Prikrylova, Zuzana
Bures, Jiri
Vajter, Jaromir
Soucek, Martin
Masopust, Jan
Martinkova, Vendula
Adamkova, Jaroslava
Hysperska, Veronika
Bebrova, Eliska
Direct detection of ESKAPEc pathogens from whole blood using the T2Bacteria Panel allows early antimicrobial stewardship intervention in patients with sepsis
title Direct detection of ESKAPEc pathogens from whole blood using the T2Bacteria Panel allows early antimicrobial stewardship intervention in patients with sepsis
title_full Direct detection of ESKAPEc pathogens from whole blood using the T2Bacteria Panel allows early antimicrobial stewardship intervention in patients with sepsis
title_fullStr Direct detection of ESKAPEc pathogens from whole blood using the T2Bacteria Panel allows early antimicrobial stewardship intervention in patients with sepsis
title_full_unstemmed Direct detection of ESKAPEc pathogens from whole blood using the T2Bacteria Panel allows early antimicrobial stewardship intervention in patients with sepsis
title_short Direct detection of ESKAPEc pathogens from whole blood using the T2Bacteria Panel allows early antimicrobial stewardship intervention in patients with sepsis
title_sort direct detection of eskapec pathogens from whole blood using the t2bacteria panel allows early antimicrobial stewardship intervention in patients with sepsis
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8209282/
https://www.ncbi.nlm.nih.gov/pubmed/34180598
http://dx.doi.org/10.1002/mbo3.1210
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