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Structural Comparison of Diplonemid Communities around the Izu Peninsula, Japan

Diplonemea (diplonemids) is one of the most abundant and species-rich protist groups in marine environments; however, their community structures among local and seasonal samples have not yet been compared. In the present study, we analyzed four diplonemid community structures around the Izu Peninsul...

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Autores principales: Yabuki, Akinori, Kawato, Masaru, Nagano, Yuriko, Tsuchida, Shinji, Yoshida, Takao, Fujiwara, Yoshihiro
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Japanese Society of Microbial Ecology / Japanese Society of Soil Microbiology / Taiwan Society of Microbial Ecology / Japanese Society of Plant Microbe Interactions / Japanese Society for Extremophiles 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8209450/
https://www.ncbi.nlm.nih.gov/pubmed/34121037
http://dx.doi.org/10.1264/jsme2.ME21012
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author Yabuki, Akinori
Kawato, Masaru
Nagano, Yuriko
Tsuchida, Shinji
Yoshida, Takao
Fujiwara, Yoshihiro
author_facet Yabuki, Akinori
Kawato, Masaru
Nagano, Yuriko
Tsuchida, Shinji
Yoshida, Takao
Fujiwara, Yoshihiro
author_sort Yabuki, Akinori
collection PubMed
description Diplonemea (diplonemids) is one of the most abundant and species-rich protist groups in marine environments; however, their community structures among local and seasonal samples have not yet been compared. In the present study, we analyzed four diplonemid community structures around the Izu Peninsula, Japan using barcode sequences amplified from environmental DNA. These sequences and the results of statistical analyses indicated that communities at the same site were more similar to each other than those in the same season. Environmental variables were also measured, and their influence on diplonemid community structures was examined. Salinity, electrical conductivity, and temperature, and their correlated variables, appeared to influence the structures of diplonemid communities, which was consistent with previous findings; however, since the results obtained did not reach statistical significance, further studies are required. A comparison of each diplonemid community indicated that some lineages were unique to specific samples, while others were consistently detected in all samples. Members of the latter type are cosmopolitan candidates and may be better adapted to the environments of the studied area. Future studies that focus on the more adaptive members will provide a more detailed understanding of the mechanisms by which diplonemids are widely distributed in marine environments and will facilitate their utilization as indicator organisms to monitor environmental changes.
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spelling pubmed-82094502021-06-30 Structural Comparison of Diplonemid Communities around the Izu Peninsula, Japan Yabuki, Akinori Kawato, Masaru Nagano, Yuriko Tsuchida, Shinji Yoshida, Takao Fujiwara, Yoshihiro Microbes Environ Regular Paper Diplonemea (diplonemids) is one of the most abundant and species-rich protist groups in marine environments; however, their community structures among local and seasonal samples have not yet been compared. In the present study, we analyzed four diplonemid community structures around the Izu Peninsula, Japan using barcode sequences amplified from environmental DNA. These sequences and the results of statistical analyses indicated that communities at the same site were more similar to each other than those in the same season. Environmental variables were also measured, and their influence on diplonemid community structures was examined. Salinity, electrical conductivity, and temperature, and their correlated variables, appeared to influence the structures of diplonemid communities, which was consistent with previous findings; however, since the results obtained did not reach statistical significance, further studies are required. A comparison of each diplonemid community indicated that some lineages were unique to specific samples, while others were consistently detected in all samples. Members of the latter type are cosmopolitan candidates and may be better adapted to the environments of the studied area. Future studies that focus on the more adaptive members will provide a more detailed understanding of the mechanisms by which diplonemids are widely distributed in marine environments and will facilitate their utilization as indicator organisms to monitor environmental changes. Japanese Society of Microbial Ecology / Japanese Society of Soil Microbiology / Taiwan Society of Microbial Ecology / Japanese Society of Plant Microbe Interactions / Japanese Society for Extremophiles 2021 2021-06-11 /pmc/articles/PMC8209450/ /pubmed/34121037 http://dx.doi.org/10.1264/jsme2.ME21012 Text en 2021 by Japanese Society of Microbial Ecology / Japanese Society of Soil Microbiology / Taiwan Society of Microbial Ecology / Japanese Society of Plant Microbe Interactions / Japanese Society for Extremophiles. https://creativecommons.org/licenses/by/3.0/This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Regular Paper
Yabuki, Akinori
Kawato, Masaru
Nagano, Yuriko
Tsuchida, Shinji
Yoshida, Takao
Fujiwara, Yoshihiro
Structural Comparison of Diplonemid Communities around the Izu Peninsula, Japan
title Structural Comparison of Diplonemid Communities around the Izu Peninsula, Japan
title_full Structural Comparison of Diplonemid Communities around the Izu Peninsula, Japan
title_fullStr Structural Comparison of Diplonemid Communities around the Izu Peninsula, Japan
title_full_unstemmed Structural Comparison of Diplonemid Communities around the Izu Peninsula, Japan
title_short Structural Comparison of Diplonemid Communities around the Izu Peninsula, Japan
title_sort structural comparison of diplonemid communities around the izu peninsula, japan
topic Regular Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8209450/
https://www.ncbi.nlm.nih.gov/pubmed/34121037
http://dx.doi.org/10.1264/jsme2.ME21012
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