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Systematic analysis of lysine 2-hydroxyisobutyrylation posttranslational modification in wheat leaves

Lysine 2-hydroxyisobutyrylation (Khib) is a recently discovered post-translational modification (PTM) showing diverse biological functions and effects in living organisms. However, the study of Khib in plant species is still relatively limited. Wheat (Triticum aestivum L.) is a global important cere...

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Autores principales: Feng, Bo, Li, Shengdong, Wang, Zongshuai, Cao, Fang, Wang, Zheng, Li, Geng, Liu, Kaichang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8211214/
https://www.ncbi.nlm.nih.gov/pubmed/34138952
http://dx.doi.org/10.1371/journal.pone.0253325
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author Feng, Bo
Li, Shengdong
Wang, Zongshuai
Cao, Fang
Wang, Zheng
Li, Geng
Liu, Kaichang
author_facet Feng, Bo
Li, Shengdong
Wang, Zongshuai
Cao, Fang
Wang, Zheng
Li, Geng
Liu, Kaichang
author_sort Feng, Bo
collection PubMed
description Lysine 2-hydroxyisobutyrylation (Khib) is a recently discovered post-translational modification (PTM) showing diverse biological functions and effects in living organisms. However, the study of Khib in plant species is still relatively limited. Wheat (Triticum aestivum L.) is a global important cereal plant. In this study, the systematic Khib analysis was performed in wheat leave tissues. A total of 3004 Khib sites in 1104 proteins were repeatedly identified. Structure characterization of these Khib peptides revealed 12 conserved sequence motifs. Function classification and enrichment analysis indicated these Khib proteins showed a wide function and pathway distribution, of which ribosome activity, protein biosynthesis and photosynthesis were the preferred biological processes. Subcellular location predication indicated chloroplast was the dominant subcellular compartment where Khib was distributed. There may be some crosstalks among Khib, lysine acetylation and lysine succinylation modification because some proteins and sites were modified by all these three acylations. The present study demonstrated the critical role of Khib in wheat biological and physiology, which has expanded the scope of Khib in plant species. Our study is an available resource and reference of Khib function demonstration and structure characterization in cereal plant, as well as in plant kingdom.
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spelling pubmed-82112142021-06-29 Systematic analysis of lysine 2-hydroxyisobutyrylation posttranslational modification in wheat leaves Feng, Bo Li, Shengdong Wang, Zongshuai Cao, Fang Wang, Zheng Li, Geng Liu, Kaichang PLoS One Research Article Lysine 2-hydroxyisobutyrylation (Khib) is a recently discovered post-translational modification (PTM) showing diverse biological functions and effects in living organisms. However, the study of Khib in plant species is still relatively limited. Wheat (Triticum aestivum L.) is a global important cereal plant. In this study, the systematic Khib analysis was performed in wheat leave tissues. A total of 3004 Khib sites in 1104 proteins were repeatedly identified. Structure characterization of these Khib peptides revealed 12 conserved sequence motifs. Function classification and enrichment analysis indicated these Khib proteins showed a wide function and pathway distribution, of which ribosome activity, protein biosynthesis and photosynthesis were the preferred biological processes. Subcellular location predication indicated chloroplast was the dominant subcellular compartment where Khib was distributed. There may be some crosstalks among Khib, lysine acetylation and lysine succinylation modification because some proteins and sites were modified by all these three acylations. The present study demonstrated the critical role of Khib in wheat biological and physiology, which has expanded the scope of Khib in plant species. Our study is an available resource and reference of Khib function demonstration and structure characterization in cereal plant, as well as in plant kingdom. Public Library of Science 2021-06-17 /pmc/articles/PMC8211214/ /pubmed/34138952 http://dx.doi.org/10.1371/journal.pone.0253325 Text en © 2021 Feng et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Feng, Bo
Li, Shengdong
Wang, Zongshuai
Cao, Fang
Wang, Zheng
Li, Geng
Liu, Kaichang
Systematic analysis of lysine 2-hydroxyisobutyrylation posttranslational modification in wheat leaves
title Systematic analysis of lysine 2-hydroxyisobutyrylation posttranslational modification in wheat leaves
title_full Systematic analysis of lysine 2-hydroxyisobutyrylation posttranslational modification in wheat leaves
title_fullStr Systematic analysis of lysine 2-hydroxyisobutyrylation posttranslational modification in wheat leaves
title_full_unstemmed Systematic analysis of lysine 2-hydroxyisobutyrylation posttranslational modification in wheat leaves
title_short Systematic analysis of lysine 2-hydroxyisobutyrylation posttranslational modification in wheat leaves
title_sort systematic analysis of lysine 2-hydroxyisobutyrylation posttranslational modification in wheat leaves
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8211214/
https://www.ncbi.nlm.nih.gov/pubmed/34138952
http://dx.doi.org/10.1371/journal.pone.0253325
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