Cargando…

Comprehensive Analysis of Regulatory Network for LINC00472 in Clear Cell Renal Cell Carcinoma

Renal cell carcinoma (RCC) accounts for about 2% to 3% of adult malignancies, and clear cell renal cell carcinoma (ccRCC) is the most common and aggressive type of kidney cancer. It accounts for 75% of all kidney tumors. Although new targeted drugs continue to appear, they are still not suitable for...

Descripción completa

Detalles Bibliográficos
Autores principales: Gao, Shuoze, Wang, Zhiping
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8211516/
https://www.ncbi.nlm.nih.gov/pubmed/34221297
http://dx.doi.org/10.1155/2021/3533608
_version_ 1783709482638901248
author Gao, Shuoze
Wang, Zhiping
author_facet Gao, Shuoze
Wang, Zhiping
author_sort Gao, Shuoze
collection PubMed
description Renal cell carcinoma (RCC) accounts for about 2% to 3% of adult malignancies, and clear cell renal cell carcinoma (ccRCC) is the most common and aggressive type of kidney cancer. It accounts for 75% of all kidney tumors. Although new targeted drugs continue to appear, they are still not suitable for all patients. Therefore, an in-depth study of the molecular mechanism of the development of ccRCC and exploration of new targets for the treatment of ccRCC will help to achieve precise treatment for ccRCC. With the development of molecular research, the study of long noncoding RNA (LncRNA) has given us a new understanding of tumors. Although LncRNA does not encode proteins, it directly interacts with proteins in various signaling pathways and affects cell functions. Therefore, it is of great significance to study the mechanism of LncRNA in ccRCC. The expression level of Linc00472 in ccRCC tissues is significantly lower than adjacent normal tissues, and its low expression is closely related to Furman's high grade. The low expression of Linc00472 is associated with poor prognosis in patients with ccRCC. The results of protein interaction and functional enrichment analysis indicate that genes upregulated in renal clear cell carcinoma may play a major role. Analysis of target gene prediction results showed that Linc00472 may be used as ceRNA in the miR-24-3p-HLA-DPB1 pathway, miR-24-3p-CXCL9 pathway, miR-221-3p-C3aR1-VEGFR2 pathway, miR-17-5p-HLA-DQA1/HLA-DQB1 pathway, and miR-17-5p-C3aR1/C5aR1-VEGFR2 pathway which play important functions. In addition, the regulatory relationship between miR-24-3p and TNFR2 (TNFRSF1B), CD36, and COL4A1 should also be noted. The value of Linc00472 in the diagnosis and treatment of ccRCC is worthy of further study.
format Online
Article
Text
id pubmed-8211516
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Hindawi
record_format MEDLINE/PubMed
spelling pubmed-82115162021-07-01 Comprehensive Analysis of Regulatory Network for LINC00472 in Clear Cell Renal Cell Carcinoma Gao, Shuoze Wang, Zhiping J Healthc Eng Research Article Renal cell carcinoma (RCC) accounts for about 2% to 3% of adult malignancies, and clear cell renal cell carcinoma (ccRCC) is the most common and aggressive type of kidney cancer. It accounts for 75% of all kidney tumors. Although new targeted drugs continue to appear, they are still not suitable for all patients. Therefore, an in-depth study of the molecular mechanism of the development of ccRCC and exploration of new targets for the treatment of ccRCC will help to achieve precise treatment for ccRCC. With the development of molecular research, the study of long noncoding RNA (LncRNA) has given us a new understanding of tumors. Although LncRNA does not encode proteins, it directly interacts with proteins in various signaling pathways and affects cell functions. Therefore, it is of great significance to study the mechanism of LncRNA in ccRCC. The expression level of Linc00472 in ccRCC tissues is significantly lower than adjacent normal tissues, and its low expression is closely related to Furman's high grade. The low expression of Linc00472 is associated with poor prognosis in patients with ccRCC. The results of protein interaction and functional enrichment analysis indicate that genes upregulated in renal clear cell carcinoma may play a major role. Analysis of target gene prediction results showed that Linc00472 may be used as ceRNA in the miR-24-3p-HLA-DPB1 pathway, miR-24-3p-CXCL9 pathway, miR-221-3p-C3aR1-VEGFR2 pathway, miR-17-5p-HLA-DQA1/HLA-DQB1 pathway, and miR-17-5p-C3aR1/C5aR1-VEGFR2 pathway which play important functions. In addition, the regulatory relationship between miR-24-3p and TNFR2 (TNFRSF1B), CD36, and COL4A1 should also be noted. The value of Linc00472 in the diagnosis and treatment of ccRCC is worthy of further study. Hindawi 2021-06-09 /pmc/articles/PMC8211516/ /pubmed/34221297 http://dx.doi.org/10.1155/2021/3533608 Text en Copyright © 2021 Shuoze Gao and Zhiping Wang. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Gao, Shuoze
Wang, Zhiping
Comprehensive Analysis of Regulatory Network for LINC00472 in Clear Cell Renal Cell Carcinoma
title Comprehensive Analysis of Regulatory Network for LINC00472 in Clear Cell Renal Cell Carcinoma
title_full Comprehensive Analysis of Regulatory Network for LINC00472 in Clear Cell Renal Cell Carcinoma
title_fullStr Comprehensive Analysis of Regulatory Network for LINC00472 in Clear Cell Renal Cell Carcinoma
title_full_unstemmed Comprehensive Analysis of Regulatory Network for LINC00472 in Clear Cell Renal Cell Carcinoma
title_short Comprehensive Analysis of Regulatory Network for LINC00472 in Clear Cell Renal Cell Carcinoma
title_sort comprehensive analysis of regulatory network for linc00472 in clear cell renal cell carcinoma
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8211516/
https://www.ncbi.nlm.nih.gov/pubmed/34221297
http://dx.doi.org/10.1155/2021/3533608
work_keys_str_mv AT gaoshuoze comprehensiveanalysisofregulatorynetworkforlinc00472inclearcellrenalcellcarcinoma
AT wangzhiping comprehensiveanalysisofregulatorynetworkforlinc00472inclearcellrenalcellcarcinoma