Cargando…
Multivariable mortality risk prediction using machine learning for COVID-19 patients at admission (AICOVID)
In Coronavirus disease 2019 (COVID-19), early identification of patients with a high risk of mortality can significantly improve triage, bed allocation, timely management, and possibly, outcome. The study objective is to develop and validate individualized mortality risk scores based on the anonymiz...
Autores principales: | , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8211710/ https://www.ncbi.nlm.nih.gov/pubmed/34140592 http://dx.doi.org/10.1038/s41598-021-92146-7 |
_version_ | 1783709523888832512 |
---|---|
author | Kar, Sujoy Chawla, Rajesh Haranath, Sai Praveen Ramasubban, Suresh Ramakrishnan, Nagarajan Vaishya, Raju Sibal, Anupam Reddy, Sangita |
author_facet | Kar, Sujoy Chawla, Rajesh Haranath, Sai Praveen Ramasubban, Suresh Ramakrishnan, Nagarajan Vaishya, Raju Sibal, Anupam Reddy, Sangita |
author_sort | Kar, Sujoy |
collection | PubMed |
description | In Coronavirus disease 2019 (COVID-19), early identification of patients with a high risk of mortality can significantly improve triage, bed allocation, timely management, and possibly, outcome. The study objective is to develop and validate individualized mortality risk scores based on the anonymized clinical and laboratory data at admission and determine the probability of Deaths at 7 and 28 days. Data of 1393 admitted patients (Expired—8.54%) was collected from six Apollo Hospital centers (from April to July 2020) using a standardized template and electronic medical records. 63 Clinical and Laboratory parameters were studied based on the patient’s initial clinical state at admission and laboratory parameters within the first 24 h. The Machine Learning (ML) modelling was performed using eXtreme Gradient Boosting (XGB) Algorithm. ‘Time to event’ using Cox Proportional Hazard Model was used and combined with XGB Algorithm. The prospective validation cohort was selected of 977 patients (Expired—8.3%) from six centers from July to October 2020. The Clinical API for the Algorithm is http://20.44.39.47/covid19v2/page1.php being used prospectively. Out of the 63 clinical and laboratory parameters, Age [adjusted hazard ratio (HR) 2.31; 95% CI 1.52–3.53], Male Gender (HR 1.72, 95% CI 1.06–2.85), Respiratory Distress (HR 1.79, 95% CI 1.32–2.53), Diabetes Mellitus (HR 1.21, 95% CI 0.83–1.77), Chronic Kidney Disease (HR 3.04, 95% CI 1.72–5.38), Coronary Artery Disease (HR 1.56, 95% CI − 0.91 to 2.69), respiratory rate > 24/min (HR 1.54, 95% CI 1.03–2.3), oxygen saturation below 90% (HR 2.84, 95% CI 1.87–4.3), Lymphocyte% in DLC (HR 1.99, 95% CI 1.23–2.32), INR (HR 1.71, 95% CI 1.31–2.13), LDH (HR 4.02, 95% CI 2.66–6.07) and Ferritin (HR 2.48, 95% CI 1.32–4.74) were found to be significant. The performance parameters of the current model is at AUC ROC Score of 0.8685 and Accuracy Score of 96.89. The validation cohort had the AUC of 0.782 and Accuracy of 0.93. The model for Mortality Risk Prediction provides insight into the COVID Clinical and Laboratory Parameters at admission. It is one of the early studies, reflecting on ‘time to event’ at the admission, accurately predicting patient outcomes. |
format | Online Article Text |
id | pubmed-8211710 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-82117102021-06-21 Multivariable mortality risk prediction using machine learning for COVID-19 patients at admission (AICOVID) Kar, Sujoy Chawla, Rajesh Haranath, Sai Praveen Ramasubban, Suresh Ramakrishnan, Nagarajan Vaishya, Raju Sibal, Anupam Reddy, Sangita Sci Rep Article In Coronavirus disease 2019 (COVID-19), early identification of patients with a high risk of mortality can significantly improve triage, bed allocation, timely management, and possibly, outcome. The study objective is to develop and validate individualized mortality risk scores based on the anonymized clinical and laboratory data at admission and determine the probability of Deaths at 7 and 28 days. Data of 1393 admitted patients (Expired—8.54%) was collected from six Apollo Hospital centers (from April to July 2020) using a standardized template and electronic medical records. 63 Clinical and Laboratory parameters were studied based on the patient’s initial clinical state at admission and laboratory parameters within the first 24 h. The Machine Learning (ML) modelling was performed using eXtreme Gradient Boosting (XGB) Algorithm. ‘Time to event’ using Cox Proportional Hazard Model was used and combined with XGB Algorithm. The prospective validation cohort was selected of 977 patients (Expired—8.3%) from six centers from July to October 2020. The Clinical API for the Algorithm is http://20.44.39.47/covid19v2/page1.php being used prospectively. Out of the 63 clinical and laboratory parameters, Age [adjusted hazard ratio (HR) 2.31; 95% CI 1.52–3.53], Male Gender (HR 1.72, 95% CI 1.06–2.85), Respiratory Distress (HR 1.79, 95% CI 1.32–2.53), Diabetes Mellitus (HR 1.21, 95% CI 0.83–1.77), Chronic Kidney Disease (HR 3.04, 95% CI 1.72–5.38), Coronary Artery Disease (HR 1.56, 95% CI − 0.91 to 2.69), respiratory rate > 24/min (HR 1.54, 95% CI 1.03–2.3), oxygen saturation below 90% (HR 2.84, 95% CI 1.87–4.3), Lymphocyte% in DLC (HR 1.99, 95% CI 1.23–2.32), INR (HR 1.71, 95% CI 1.31–2.13), LDH (HR 4.02, 95% CI 2.66–6.07) and Ferritin (HR 2.48, 95% CI 1.32–4.74) were found to be significant. The performance parameters of the current model is at AUC ROC Score of 0.8685 and Accuracy Score of 96.89. The validation cohort had the AUC of 0.782 and Accuracy of 0.93. The model for Mortality Risk Prediction provides insight into the COVID Clinical and Laboratory Parameters at admission. It is one of the early studies, reflecting on ‘time to event’ at the admission, accurately predicting patient outcomes. Nature Publishing Group UK 2021-06-17 /pmc/articles/PMC8211710/ /pubmed/34140592 http://dx.doi.org/10.1038/s41598-021-92146-7 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Kar, Sujoy Chawla, Rajesh Haranath, Sai Praveen Ramasubban, Suresh Ramakrishnan, Nagarajan Vaishya, Raju Sibal, Anupam Reddy, Sangita Multivariable mortality risk prediction using machine learning for COVID-19 patients at admission (AICOVID) |
title | Multivariable mortality risk prediction using machine learning for COVID-19 patients at admission (AICOVID) |
title_full | Multivariable mortality risk prediction using machine learning for COVID-19 patients at admission (AICOVID) |
title_fullStr | Multivariable mortality risk prediction using machine learning for COVID-19 patients at admission (AICOVID) |
title_full_unstemmed | Multivariable mortality risk prediction using machine learning for COVID-19 patients at admission (AICOVID) |
title_short | Multivariable mortality risk prediction using machine learning for COVID-19 patients at admission (AICOVID) |
title_sort | multivariable mortality risk prediction using machine learning for covid-19 patients at admission (aicovid) |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8211710/ https://www.ncbi.nlm.nih.gov/pubmed/34140592 http://dx.doi.org/10.1038/s41598-021-92146-7 |
work_keys_str_mv | AT karsujoy multivariablemortalityriskpredictionusingmachinelearningforcovid19patientsatadmissionaicovid AT chawlarajesh multivariablemortalityriskpredictionusingmachinelearningforcovid19patientsatadmissionaicovid AT haranathsaipraveen multivariablemortalityriskpredictionusingmachinelearningforcovid19patientsatadmissionaicovid AT ramasubbansuresh multivariablemortalityriskpredictionusingmachinelearningforcovid19patientsatadmissionaicovid AT ramakrishnannagarajan multivariablemortalityriskpredictionusingmachinelearningforcovid19patientsatadmissionaicovid AT vaishyaraju multivariablemortalityriskpredictionusingmachinelearningforcovid19patientsatadmissionaicovid AT sibalanupam multivariablemortalityriskpredictionusingmachinelearningforcovid19patientsatadmissionaicovid AT reddysangita multivariablemortalityriskpredictionusingmachinelearningforcovid19patientsatadmissionaicovid |