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Isolation and characterization of a new cold-active protease from psychrotrophic bacteria of Western Himalayan glacial soil

As an approach to the exploration of cold-active enzymes, in this study, we isolated a cold-active protease produced by psychrotrophic bacteria from glacial soils of Thajwas Glacier, Himalayas. The isolated strain BO1, identified as Bacillus pumilus, grew well within a temperature range of 4–30 °C....

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Autores principales: Farooq, Saleem, Nazir, Ruqeya, Ganai, Shabir Ahmad, Ganai, Bashir Ahmad
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8211794/
https://www.ncbi.nlm.nih.gov/pubmed/34140593
http://dx.doi.org/10.1038/s41598-021-92197-w
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author Farooq, Saleem
Nazir, Ruqeya
Ganai, Shabir Ahmad
Ganai, Bashir Ahmad
author_facet Farooq, Saleem
Nazir, Ruqeya
Ganai, Shabir Ahmad
Ganai, Bashir Ahmad
author_sort Farooq, Saleem
collection PubMed
description As an approach to the exploration of cold-active enzymes, in this study, we isolated a cold-active protease produced by psychrotrophic bacteria from glacial soils of Thajwas Glacier, Himalayas. The isolated strain BO1, identified as Bacillus pumilus, grew well within a temperature range of 4–30 °C. After its qualitative and quantitative screening, the cold-active protease (Apr-BO1) was purified. The Apr-BO1 had a molecular mass of 38 kDa and showed maximum (37.02 U/mg) specific activity at 20 °C, with casein as substrate. It was stable and active between the temperature range of 5–35 °C and pH 6.0–12.0, with an optimum temperature of 20 °C at pH 9.0. The Apr-BO1 had low K(m) value of 1.0 mg/ml and V(max) 10.0 µmol/ml/min. Moreover, it displayed better tolerance to organic solvents, surfactants, metal ions and reducing agents than most alkaline proteases. The results exhibited that it effectively removed the stains even in a cold wash and could be considered a decent detergent additive. Furthermore, through protein modelling, the structure of this protease was generated from template, subtilisin E of Bacillus subtilis (PDB ID: 3WHI), and different methods checked its quality. For the first time, this study reported the protein sequence for psychrotrophic Apr-BO1 and brought forth its novelty among other cold-active proteases.
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spelling pubmed-82117942021-06-21 Isolation and characterization of a new cold-active protease from psychrotrophic bacteria of Western Himalayan glacial soil Farooq, Saleem Nazir, Ruqeya Ganai, Shabir Ahmad Ganai, Bashir Ahmad Sci Rep Article As an approach to the exploration of cold-active enzymes, in this study, we isolated a cold-active protease produced by psychrotrophic bacteria from glacial soils of Thajwas Glacier, Himalayas. The isolated strain BO1, identified as Bacillus pumilus, grew well within a temperature range of 4–30 °C. After its qualitative and quantitative screening, the cold-active protease (Apr-BO1) was purified. The Apr-BO1 had a molecular mass of 38 kDa and showed maximum (37.02 U/mg) specific activity at 20 °C, with casein as substrate. It was stable and active between the temperature range of 5–35 °C and pH 6.0–12.0, with an optimum temperature of 20 °C at pH 9.0. The Apr-BO1 had low K(m) value of 1.0 mg/ml and V(max) 10.0 µmol/ml/min. Moreover, it displayed better tolerance to organic solvents, surfactants, metal ions and reducing agents than most alkaline proteases. The results exhibited that it effectively removed the stains even in a cold wash and could be considered a decent detergent additive. Furthermore, through protein modelling, the structure of this protease was generated from template, subtilisin E of Bacillus subtilis (PDB ID: 3WHI), and different methods checked its quality. For the first time, this study reported the protein sequence for psychrotrophic Apr-BO1 and brought forth its novelty among other cold-active proteases. Nature Publishing Group UK 2021-06-17 /pmc/articles/PMC8211794/ /pubmed/34140593 http://dx.doi.org/10.1038/s41598-021-92197-w Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Farooq, Saleem
Nazir, Ruqeya
Ganai, Shabir Ahmad
Ganai, Bashir Ahmad
Isolation and characterization of a new cold-active protease from psychrotrophic bacteria of Western Himalayan glacial soil
title Isolation and characterization of a new cold-active protease from psychrotrophic bacteria of Western Himalayan glacial soil
title_full Isolation and characterization of a new cold-active protease from psychrotrophic bacteria of Western Himalayan glacial soil
title_fullStr Isolation and characterization of a new cold-active protease from psychrotrophic bacteria of Western Himalayan glacial soil
title_full_unstemmed Isolation and characterization of a new cold-active protease from psychrotrophic bacteria of Western Himalayan glacial soil
title_short Isolation and characterization of a new cold-active protease from psychrotrophic bacteria of Western Himalayan glacial soil
title_sort isolation and characterization of a new cold-active protease from psychrotrophic bacteria of western himalayan glacial soil
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8211794/
https://www.ncbi.nlm.nih.gov/pubmed/34140593
http://dx.doi.org/10.1038/s41598-021-92197-w
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