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An overview of Agaricus section Hondenses and Agaricus section Xanthodermatei with description of eight new species from Pakistan
In a recent revision of the genus Agaricus, A. section Xanthodermatei was split into two sections A. sect. Hondenses and A. sect. Xanthodermatei. Our objectives were to investigate the species diversity of both sections in Pakistan and to give an overview of the major clades. Phylogenetic analyses b...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8213768/ https://www.ncbi.nlm.nih.gov/pubmed/34145323 http://dx.doi.org/10.1038/s41598-021-92261-5 |
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author | Bashir, Hira Chen, Jie Jabeen, Sana Ullah, Sadiq Khan, Junaid Niazi, Abdul Rehman Zhang, Mingzhe Khalid, Abdul Nasir Parra, Luis Alberto Callac, Philippe |
author_facet | Bashir, Hira Chen, Jie Jabeen, Sana Ullah, Sadiq Khan, Junaid Niazi, Abdul Rehman Zhang, Mingzhe Khalid, Abdul Nasir Parra, Luis Alberto Callac, Philippe |
author_sort | Bashir, Hira |
collection | PubMed |
description | In a recent revision of the genus Agaricus, A. section Xanthodermatei was split into two sections A. sect. Hondenses and A. sect. Xanthodermatei. Our objectives were to investigate the species diversity of both sections in Pakistan and to give an overview of the major clades. Phylogenetic analyses based on the combined nucLSU, ITS and TEF1 dataset from 35 specimens of both sections revealed three major clades. Analyses based on ITS dataset and 106 specimens, including 33 from Pakistan, reveal eight new species and one new record species. These nine species are described in detail. It is noteworthy that intraspecific variability as well as interspecific variability between closely related species were very low in ITS sequences in many cases. In the case of the two new species A. xanthochromaticus and A. griseovariegatus, TEF1 sequence data were much more efficient than ITS to distinguish these species from each other. The other new species are A. atroumbonatus, A. fumidicolor, A. macropeplus, A. parviniveus, A. swaticus and A. bambusetorum. The latter is the only new species of A. sect. Hondenses in which it is morphologically atypical and also the unique (sub)tropical species. Agaricus gregariomyces is recorded for the first time in Pakistan. In addition, brief descriptions are provided not only for A. bisporiticus, A. endoxanthus and A. punjabensis, which are reported again in Pakistan, but also for A. californicus, which is reported for the first time in Spain and outside North America. In total 12 species of both sections were reported in Pakistan and half of them were from subtropical climatic areas, underlining the contribution of the climatic diversity to the high species richness in this country. |
format | Online Article Text |
id | pubmed-8213768 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-82137682021-06-22 An overview of Agaricus section Hondenses and Agaricus section Xanthodermatei with description of eight new species from Pakistan Bashir, Hira Chen, Jie Jabeen, Sana Ullah, Sadiq Khan, Junaid Niazi, Abdul Rehman Zhang, Mingzhe Khalid, Abdul Nasir Parra, Luis Alberto Callac, Philippe Sci Rep Article In a recent revision of the genus Agaricus, A. section Xanthodermatei was split into two sections A. sect. Hondenses and A. sect. Xanthodermatei. Our objectives were to investigate the species diversity of both sections in Pakistan and to give an overview of the major clades. Phylogenetic analyses based on the combined nucLSU, ITS and TEF1 dataset from 35 specimens of both sections revealed three major clades. Analyses based on ITS dataset and 106 specimens, including 33 from Pakistan, reveal eight new species and one new record species. These nine species are described in detail. It is noteworthy that intraspecific variability as well as interspecific variability between closely related species were very low in ITS sequences in many cases. In the case of the two new species A. xanthochromaticus and A. griseovariegatus, TEF1 sequence data were much more efficient than ITS to distinguish these species from each other. The other new species are A. atroumbonatus, A. fumidicolor, A. macropeplus, A. parviniveus, A. swaticus and A. bambusetorum. The latter is the only new species of A. sect. Hondenses in which it is morphologically atypical and also the unique (sub)tropical species. Agaricus gregariomyces is recorded for the first time in Pakistan. In addition, brief descriptions are provided not only for A. bisporiticus, A. endoxanthus and A. punjabensis, which are reported again in Pakistan, but also for A. californicus, which is reported for the first time in Spain and outside North America. In total 12 species of both sections were reported in Pakistan and half of them were from subtropical climatic areas, underlining the contribution of the climatic diversity to the high species richness in this country. Nature Publishing Group UK 2021-06-18 /pmc/articles/PMC8213768/ /pubmed/34145323 http://dx.doi.org/10.1038/s41598-021-92261-5 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Bashir, Hira Chen, Jie Jabeen, Sana Ullah, Sadiq Khan, Junaid Niazi, Abdul Rehman Zhang, Mingzhe Khalid, Abdul Nasir Parra, Luis Alberto Callac, Philippe An overview of Agaricus section Hondenses and Agaricus section Xanthodermatei with description of eight new species from Pakistan |
title | An overview of Agaricus section Hondenses and Agaricus section Xanthodermatei with description of eight new species from Pakistan |
title_full | An overview of Agaricus section Hondenses and Agaricus section Xanthodermatei with description of eight new species from Pakistan |
title_fullStr | An overview of Agaricus section Hondenses and Agaricus section Xanthodermatei with description of eight new species from Pakistan |
title_full_unstemmed | An overview of Agaricus section Hondenses and Agaricus section Xanthodermatei with description of eight new species from Pakistan |
title_short | An overview of Agaricus section Hondenses and Agaricus section Xanthodermatei with description of eight new species from Pakistan |
title_sort | overview of agaricus section hondenses and agaricus section xanthodermatei with description of eight new species from pakistan |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8213768/ https://www.ncbi.nlm.nih.gov/pubmed/34145323 http://dx.doi.org/10.1038/s41598-021-92261-5 |
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