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Deep learning for end-to-end kidney cancer diagnosis on multi-phase abdominal computed tomography

In 2020, it is estimated that 73,750 kidney cancer cases were diagnosed, and 14,830 people died from cancer in the United States. Preoperative multi-phase abdominal computed tomography (CT) is often used for detecting lesions and classifying histologic subtypes of renal tumor to avoid unnecessary bi...

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Autores principales: Uhm, Kwang-Hyun, Jung, Seung-Won, Choi, Moon Hyung, Shin, Hong-Kyu, Yoo, Jae-Ik, Oh, Se Won, Kim, Jee Young, Kim, Hyun Gi, Lee, Young Joon, Youn, Seo Yeon, Hong, Sung-Hoo, Ko, Sung-Jea
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8213852/
https://www.ncbi.nlm.nih.gov/pubmed/34145374
http://dx.doi.org/10.1038/s41698-021-00195-y
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author Uhm, Kwang-Hyun
Jung, Seung-Won
Choi, Moon Hyung
Shin, Hong-Kyu
Yoo, Jae-Ik
Oh, Se Won
Kim, Jee Young
Kim, Hyun Gi
Lee, Young Joon
Youn, Seo Yeon
Hong, Sung-Hoo
Ko, Sung-Jea
author_facet Uhm, Kwang-Hyun
Jung, Seung-Won
Choi, Moon Hyung
Shin, Hong-Kyu
Yoo, Jae-Ik
Oh, Se Won
Kim, Jee Young
Kim, Hyun Gi
Lee, Young Joon
Youn, Seo Yeon
Hong, Sung-Hoo
Ko, Sung-Jea
author_sort Uhm, Kwang-Hyun
collection PubMed
description In 2020, it is estimated that 73,750 kidney cancer cases were diagnosed, and 14,830 people died from cancer in the United States. Preoperative multi-phase abdominal computed tomography (CT) is often used for detecting lesions and classifying histologic subtypes of renal tumor to avoid unnecessary biopsy or surgery. However, there exists inter-observer variability due to subtle differences in the imaging features of tumor subtypes, which makes decisions on treatment challenging. While deep learning has been recently applied to the automated diagnosis of renal tumor, classification of a wide range of subtype classes has not been sufficiently studied yet. In this paper, we propose an end-to-end deep learning model for the differential diagnosis of five major histologic subtypes of renal tumors including both benign and malignant tumors on multi-phase CT. Our model is a unified framework to simultaneously identify lesions and classify subtypes for the diagnosis without manual intervention. We trained and tested the model using CT data from 308 patients who underwent nephrectomy for renal tumors. The model achieved an area under the curve (AUC) of 0.889, and outperformed radiologists for most subtypes. We further validated the model on an independent dataset of 184 patients from The Cancer Imaging Archive (TCIA). The AUC for this dataset was 0.855, and the model performed comparably to the radiologists. These results indicate that our model can achieve similar or better diagnostic performance than radiologists in differentiating a wide range of renal tumors on multi-phase CT.
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spelling pubmed-82138522021-07-01 Deep learning for end-to-end kidney cancer diagnosis on multi-phase abdominal computed tomography Uhm, Kwang-Hyun Jung, Seung-Won Choi, Moon Hyung Shin, Hong-Kyu Yoo, Jae-Ik Oh, Se Won Kim, Jee Young Kim, Hyun Gi Lee, Young Joon Youn, Seo Yeon Hong, Sung-Hoo Ko, Sung-Jea NPJ Precis Oncol Brief Communication In 2020, it is estimated that 73,750 kidney cancer cases were diagnosed, and 14,830 people died from cancer in the United States. Preoperative multi-phase abdominal computed tomography (CT) is often used for detecting lesions and classifying histologic subtypes of renal tumor to avoid unnecessary biopsy or surgery. However, there exists inter-observer variability due to subtle differences in the imaging features of tumor subtypes, which makes decisions on treatment challenging. While deep learning has been recently applied to the automated diagnosis of renal tumor, classification of a wide range of subtype classes has not been sufficiently studied yet. In this paper, we propose an end-to-end deep learning model for the differential diagnosis of five major histologic subtypes of renal tumors including both benign and malignant tumors on multi-phase CT. Our model is a unified framework to simultaneously identify lesions and classify subtypes for the diagnosis without manual intervention. We trained and tested the model using CT data from 308 patients who underwent nephrectomy for renal tumors. The model achieved an area under the curve (AUC) of 0.889, and outperformed radiologists for most subtypes. We further validated the model on an independent dataset of 184 patients from The Cancer Imaging Archive (TCIA). The AUC for this dataset was 0.855, and the model performed comparably to the radiologists. These results indicate that our model can achieve similar or better diagnostic performance than radiologists in differentiating a wide range of renal tumors on multi-phase CT. Nature Publishing Group UK 2021-06-18 /pmc/articles/PMC8213852/ /pubmed/34145374 http://dx.doi.org/10.1038/s41698-021-00195-y Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Brief Communication
Uhm, Kwang-Hyun
Jung, Seung-Won
Choi, Moon Hyung
Shin, Hong-Kyu
Yoo, Jae-Ik
Oh, Se Won
Kim, Jee Young
Kim, Hyun Gi
Lee, Young Joon
Youn, Seo Yeon
Hong, Sung-Hoo
Ko, Sung-Jea
Deep learning for end-to-end kidney cancer diagnosis on multi-phase abdominal computed tomography
title Deep learning for end-to-end kidney cancer diagnosis on multi-phase abdominal computed tomography
title_full Deep learning for end-to-end kidney cancer diagnosis on multi-phase abdominal computed tomography
title_fullStr Deep learning for end-to-end kidney cancer diagnosis on multi-phase abdominal computed tomography
title_full_unstemmed Deep learning for end-to-end kidney cancer diagnosis on multi-phase abdominal computed tomography
title_short Deep learning for end-to-end kidney cancer diagnosis on multi-phase abdominal computed tomography
title_sort deep learning for end-to-end kidney cancer diagnosis on multi-phase abdominal computed tomography
topic Brief Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8213852/
https://www.ncbi.nlm.nih.gov/pubmed/34145374
http://dx.doi.org/10.1038/s41698-021-00195-y
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