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Comparison of Gut Microbiota of Yaks From Different Geographical Regions

Gut microbiota are closely linked to host health and adaptability to different geographical environments. However, information on the influence of different geographical conditions on the intestinal microbiota of yaks is limited. In this study, 18 yak fecal samples were collected from three regions...

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Autores principales: Liu, Wenwen, Wang, Qiang, Song, Jiajia, Xin, Jinwei, Zhang, Songshan, Lei, Yuanhua, Yang, Yuanli, Xie, Peng, Suo, Huayi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8216380/
https://www.ncbi.nlm.nih.gov/pubmed/34163445
http://dx.doi.org/10.3389/fmicb.2021.666940
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author Liu, Wenwen
Wang, Qiang
Song, Jiajia
Xin, Jinwei
Zhang, Songshan
Lei, Yuanhua
Yang, Yuanli
Xie, Peng
Suo, Huayi
author_facet Liu, Wenwen
Wang, Qiang
Song, Jiajia
Xin, Jinwei
Zhang, Songshan
Lei, Yuanhua
Yang, Yuanli
Xie, Peng
Suo, Huayi
author_sort Liu, Wenwen
collection PubMed
description Gut microbiota are closely linked to host health and adaptability to different geographical environments. However, information on the influence of different geographical conditions on the intestinal microbiota of yaks is limited. In this study, 18 yak fecal samples were collected from three regions of China, namely Shangri-la, Lhasa, and Yushu, and were analyzed via high-throughput sequencing. The alpha diversity, as measured by the Shannon, ACE, and Chao indices, was the highest in the Shangri-la samples. Principal coordinate analysis detected significant differences in the composition of the intestinal microbiota of yaks from different regions. A total of six phyla, 21 families, and 29 genera were identified in the fecal samples. The dominant phyla in the samples were Firmicutes and Bacteroidetes, and the most abundant family was Ruminococcaceae. In addition, Ruminococcaceae_UCG-005 was the predominant genus and was more abundant in Yushu samples than in other samples. However, the predicted functional gene composition of the gut microbiota of yaks from different regions was similar. Our results revealed that geographical conditions influence the diversity and composition of the intestinal microbiota of yaks.
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spelling pubmed-82163802021-06-22 Comparison of Gut Microbiota of Yaks From Different Geographical Regions Liu, Wenwen Wang, Qiang Song, Jiajia Xin, Jinwei Zhang, Songshan Lei, Yuanhua Yang, Yuanli Xie, Peng Suo, Huayi Front Microbiol Microbiology Gut microbiota are closely linked to host health and adaptability to different geographical environments. However, information on the influence of different geographical conditions on the intestinal microbiota of yaks is limited. In this study, 18 yak fecal samples were collected from three regions of China, namely Shangri-la, Lhasa, and Yushu, and were analyzed via high-throughput sequencing. The alpha diversity, as measured by the Shannon, ACE, and Chao indices, was the highest in the Shangri-la samples. Principal coordinate analysis detected significant differences in the composition of the intestinal microbiota of yaks from different regions. A total of six phyla, 21 families, and 29 genera were identified in the fecal samples. The dominant phyla in the samples were Firmicutes and Bacteroidetes, and the most abundant family was Ruminococcaceae. In addition, Ruminococcaceae_UCG-005 was the predominant genus and was more abundant in Yushu samples than in other samples. However, the predicted functional gene composition of the gut microbiota of yaks from different regions was similar. Our results revealed that geographical conditions influence the diversity and composition of the intestinal microbiota of yaks. Frontiers Media S.A. 2021-06-07 /pmc/articles/PMC8216380/ /pubmed/34163445 http://dx.doi.org/10.3389/fmicb.2021.666940 Text en Copyright © 2021 Liu, Wang, Song, Xin, Zhang, Lei, Yang, Xie and Suo. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Liu, Wenwen
Wang, Qiang
Song, Jiajia
Xin, Jinwei
Zhang, Songshan
Lei, Yuanhua
Yang, Yuanli
Xie, Peng
Suo, Huayi
Comparison of Gut Microbiota of Yaks From Different Geographical Regions
title Comparison of Gut Microbiota of Yaks From Different Geographical Regions
title_full Comparison of Gut Microbiota of Yaks From Different Geographical Regions
title_fullStr Comparison of Gut Microbiota of Yaks From Different Geographical Regions
title_full_unstemmed Comparison of Gut Microbiota of Yaks From Different Geographical Regions
title_short Comparison of Gut Microbiota of Yaks From Different Geographical Regions
title_sort comparison of gut microbiota of yaks from different geographical regions
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8216380/
https://www.ncbi.nlm.nih.gov/pubmed/34163445
http://dx.doi.org/10.3389/fmicb.2021.666940
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