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Automatic method for classifying COVID-19 patients based on chest X-ray images, using deep features and PSO-optimized XGBoost

The COVID-19 pandemic, which originated in December 2019 in the city of Wuhan, China, continues to have a devastating effect on the health and well-being of the global population. Currently, approximately 8.8 million people have already been infected and more than 465,740 people have died worldwide....

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Autores principales: Dias Júnior, Domingos Alves, da Cruz, Luana Batista, Bandeira Diniz, João Otávio, França da Silva, Giovanni Lucca, Junior, Geraldo Braz, Silva, Aristófanes Corrêa, de Paiva, Anselmo Cardoso, Nunes, Rodolfo Acatauassú, Gattass, Marcelo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier Ltd. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8218245/
https://www.ncbi.nlm.nih.gov/pubmed/34177133
http://dx.doi.org/10.1016/j.eswa.2021.115452
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author Dias Júnior, Domingos Alves
da Cruz, Luana Batista
Bandeira Diniz, João Otávio
França da Silva, Giovanni Lucca
Junior, Geraldo Braz
Silva, Aristófanes Corrêa
de Paiva, Anselmo Cardoso
Nunes, Rodolfo Acatauassú
Gattass, Marcelo
author_facet Dias Júnior, Domingos Alves
da Cruz, Luana Batista
Bandeira Diniz, João Otávio
França da Silva, Giovanni Lucca
Junior, Geraldo Braz
Silva, Aristófanes Corrêa
de Paiva, Anselmo Cardoso
Nunes, Rodolfo Acatauassú
Gattass, Marcelo
author_sort Dias Júnior, Domingos Alves
collection PubMed
description The COVID-19 pandemic, which originated in December 2019 in the city of Wuhan, China, continues to have a devastating effect on the health and well-being of the global population. Currently, approximately 8.8 million people have already been infected and more than 465,740 people have died worldwide. An important step in combating COVID-19 is the screening of infected patients using chest X-ray (CXR) images. However, this task is extremely time-consuming and prone to variability among specialists owing to its heterogeneity. Therefore, the present study aims to assist specialists in identifying COVID-19 patients from their chest radiographs, using automated computational techniques. The proposed method has four main steps: (1) the acquisition of the dataset, from two public databases; (2) the standardization of images through preprocessing; (3) the extraction of features using a deep features-based approach implemented through the networks VGG19, Inception-v3, and ResNet50; (4) the classifying of images into COVID-19 groups, using eXtreme Gradient Boosting (XGBoost) optimized by particle swarm optimization (PSO). In the best-case scenario, the proposed method achieved an accuracy of 98.71%, a precision of 98.89%, a recall of 99.63%, and an F1-score of 99.25%. In our study, we demonstrated that the problem of classifying CXR images of patients under COVID-19 and non-COVID-19 conditions can be solved efficiently by combining a deep features-based approach with a robust classifier (XGBoost) optimized by an evolutionary algorithm (PSO). The proposed method offers considerable advantages for clinicians seeking to tackle the current COVID-19 pandemic.
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spelling pubmed-82182452021-06-23 Automatic method for classifying COVID-19 patients based on chest X-ray images, using deep features and PSO-optimized XGBoost Dias Júnior, Domingos Alves da Cruz, Luana Batista Bandeira Diniz, João Otávio França da Silva, Giovanni Lucca Junior, Geraldo Braz Silva, Aristófanes Corrêa de Paiva, Anselmo Cardoso Nunes, Rodolfo Acatauassú Gattass, Marcelo Expert Syst Appl Article The COVID-19 pandemic, which originated in December 2019 in the city of Wuhan, China, continues to have a devastating effect on the health and well-being of the global population. Currently, approximately 8.8 million people have already been infected and more than 465,740 people have died worldwide. An important step in combating COVID-19 is the screening of infected patients using chest X-ray (CXR) images. However, this task is extremely time-consuming and prone to variability among specialists owing to its heterogeneity. Therefore, the present study aims to assist specialists in identifying COVID-19 patients from their chest radiographs, using automated computational techniques. The proposed method has four main steps: (1) the acquisition of the dataset, from two public databases; (2) the standardization of images through preprocessing; (3) the extraction of features using a deep features-based approach implemented through the networks VGG19, Inception-v3, and ResNet50; (4) the classifying of images into COVID-19 groups, using eXtreme Gradient Boosting (XGBoost) optimized by particle swarm optimization (PSO). In the best-case scenario, the proposed method achieved an accuracy of 98.71%, a precision of 98.89%, a recall of 99.63%, and an F1-score of 99.25%. In our study, we demonstrated that the problem of classifying CXR images of patients under COVID-19 and non-COVID-19 conditions can be solved efficiently by combining a deep features-based approach with a robust classifier (XGBoost) optimized by an evolutionary algorithm (PSO). The proposed method offers considerable advantages for clinicians seeking to tackle the current COVID-19 pandemic. Elsevier Ltd. 2021-11-30 2021-06-22 /pmc/articles/PMC8218245/ /pubmed/34177133 http://dx.doi.org/10.1016/j.eswa.2021.115452 Text en © 2021 Elsevier Ltd. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Dias Júnior, Domingos Alves
da Cruz, Luana Batista
Bandeira Diniz, João Otávio
França da Silva, Giovanni Lucca
Junior, Geraldo Braz
Silva, Aristófanes Corrêa
de Paiva, Anselmo Cardoso
Nunes, Rodolfo Acatauassú
Gattass, Marcelo
Automatic method for classifying COVID-19 patients based on chest X-ray images, using deep features and PSO-optimized XGBoost
title Automatic method for classifying COVID-19 patients based on chest X-ray images, using deep features and PSO-optimized XGBoost
title_full Automatic method for classifying COVID-19 patients based on chest X-ray images, using deep features and PSO-optimized XGBoost
title_fullStr Automatic method for classifying COVID-19 patients based on chest X-ray images, using deep features and PSO-optimized XGBoost
title_full_unstemmed Automatic method for classifying COVID-19 patients based on chest X-ray images, using deep features and PSO-optimized XGBoost
title_short Automatic method for classifying COVID-19 patients based on chest X-ray images, using deep features and PSO-optimized XGBoost
title_sort automatic method for classifying covid-19 patients based on chest x-ray images, using deep features and pso-optimized xgboost
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8218245/
https://www.ncbi.nlm.nih.gov/pubmed/34177133
http://dx.doi.org/10.1016/j.eswa.2021.115452
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