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Deciphering controversial results of cell proliferation on TiO(2) nanotubes using machine learning
With the rapid development of biomedical sciences, contradictory results on the relationships between biological responses and material properties emerge continuously, adding to the challenge of interpreting the incomprehensible interfacial process. In the present paper, we use cell proliferation on...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8218935/ https://www.ncbi.nlm.nih.gov/pubmed/34168893 http://dx.doi.org/10.1093/rb/rbab025 |
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author | Shen, Ziao Wang, Si Shen, Zhenyu Tang, Yufei Xu, Junbin Lin, Changjian Chen, Xun Huang, Qiaoling |
author_facet | Shen, Ziao Wang, Si Shen, Zhenyu Tang, Yufei Xu, Junbin Lin, Changjian Chen, Xun Huang, Qiaoling |
author_sort | Shen, Ziao |
collection | PubMed |
description | With the rapid development of biomedical sciences, contradictory results on the relationships between biological responses and material properties emerge continuously, adding to the challenge of interpreting the incomprehensible interfacial process. In the present paper, we use cell proliferation on titanium dioxide nanotubes (TNTs) as a case study and apply machine learning methodologies to decipher contradictory results in the literature. The gradient boosting decision tree model demonstrates that cell density has a higher impact on cell proliferation than other obtainable experimental features in most publications. Together with the variation of other essential features, the controversy of cell proliferation trends on various TNTs is understandable. By traversing all combinational experimental features and the corresponding forecast using an exhausted grid search strategy, we find that adjusting cell density and sterilization methods can simultaneously induce opposite cell proliferation trends on various TNTs diameter, which is further validated by experiments. This case study reveals that machine learning is a burgeoning tool in deciphering controversial results in biomedical researches, opening up an avenue to explore the structure–property relationships of biomaterials. |
format | Online Article Text |
id | pubmed-8218935 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-82189352021-06-23 Deciphering controversial results of cell proliferation on TiO(2) nanotubes using machine learning Shen, Ziao Wang, Si Shen, Zhenyu Tang, Yufei Xu, Junbin Lin, Changjian Chen, Xun Huang, Qiaoling Regen Biomater Research Article With the rapid development of biomedical sciences, contradictory results on the relationships between biological responses and material properties emerge continuously, adding to the challenge of interpreting the incomprehensible interfacial process. In the present paper, we use cell proliferation on titanium dioxide nanotubes (TNTs) as a case study and apply machine learning methodologies to decipher contradictory results in the literature. The gradient boosting decision tree model demonstrates that cell density has a higher impact on cell proliferation than other obtainable experimental features in most publications. Together with the variation of other essential features, the controversy of cell proliferation trends on various TNTs is understandable. By traversing all combinational experimental features and the corresponding forecast using an exhausted grid search strategy, we find that adjusting cell density and sterilization methods can simultaneously induce opposite cell proliferation trends on various TNTs diameter, which is further validated by experiments. This case study reveals that machine learning is a burgeoning tool in deciphering controversial results in biomedical researches, opening up an avenue to explore the structure–property relationships of biomaterials. Oxford University Press 2021-06-21 /pmc/articles/PMC8218935/ /pubmed/34168893 http://dx.doi.org/10.1093/rb/rbab025 Text en © The Author(s) 2021. Published by Oxford University Press. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Shen, Ziao Wang, Si Shen, Zhenyu Tang, Yufei Xu, Junbin Lin, Changjian Chen, Xun Huang, Qiaoling Deciphering controversial results of cell proliferation on TiO(2) nanotubes using machine learning |
title | Deciphering controversial results of cell proliferation on TiO(2) nanotubes using machine learning |
title_full | Deciphering controversial results of cell proliferation on TiO(2) nanotubes using machine learning |
title_fullStr | Deciphering controversial results of cell proliferation on TiO(2) nanotubes using machine learning |
title_full_unstemmed | Deciphering controversial results of cell proliferation on TiO(2) nanotubes using machine learning |
title_short | Deciphering controversial results of cell proliferation on TiO(2) nanotubes using machine learning |
title_sort | deciphering controversial results of cell proliferation on tio(2) nanotubes using machine learning |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8218935/ https://www.ncbi.nlm.nih.gov/pubmed/34168893 http://dx.doi.org/10.1093/rb/rbab025 |
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