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Deciphering controversial results of cell proliferation on TiO(2) nanotubes using machine learning

With the rapid development of biomedical sciences, contradictory results on the relationships between biological responses and material properties emerge continuously, adding to the challenge of interpreting the incomprehensible interfacial process. In the present paper, we use cell proliferation on...

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Detalles Bibliográficos
Autores principales: Shen, Ziao, Wang, Si, Shen, Zhenyu, Tang, Yufei, Xu, Junbin, Lin, Changjian, Chen, Xun, Huang, Qiaoling
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8218935/
https://www.ncbi.nlm.nih.gov/pubmed/34168893
http://dx.doi.org/10.1093/rb/rbab025
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author Shen, Ziao
Wang, Si
Shen, Zhenyu
Tang, Yufei
Xu, Junbin
Lin, Changjian
Chen, Xun
Huang, Qiaoling
author_facet Shen, Ziao
Wang, Si
Shen, Zhenyu
Tang, Yufei
Xu, Junbin
Lin, Changjian
Chen, Xun
Huang, Qiaoling
author_sort Shen, Ziao
collection PubMed
description With the rapid development of biomedical sciences, contradictory results on the relationships between biological responses and material properties emerge continuously, adding to the challenge of interpreting the incomprehensible interfacial process. In the present paper, we use cell proliferation on titanium dioxide nanotubes (TNTs) as a case study and apply machine learning methodologies to decipher contradictory results in the literature. The gradient boosting decision tree model demonstrates that cell density has a higher impact on cell proliferation than other obtainable experimental features in most publications. Together with the variation of other essential features, the controversy of cell proliferation trends on various TNTs is understandable. By traversing all combinational experimental features and the corresponding forecast using an exhausted grid search strategy, we find that adjusting cell density and sterilization methods can simultaneously induce opposite cell proliferation trends on various TNTs diameter, which is further validated by experiments. This case study reveals that machine learning is a burgeoning tool in deciphering controversial results in biomedical researches, opening up an avenue to explore the structure–property relationships of biomaterials.
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spelling pubmed-82189352021-06-23 Deciphering controversial results of cell proliferation on TiO(2) nanotubes using machine learning Shen, Ziao Wang, Si Shen, Zhenyu Tang, Yufei Xu, Junbin Lin, Changjian Chen, Xun Huang, Qiaoling Regen Biomater Research Article With the rapid development of biomedical sciences, contradictory results on the relationships between biological responses and material properties emerge continuously, adding to the challenge of interpreting the incomprehensible interfacial process. In the present paper, we use cell proliferation on titanium dioxide nanotubes (TNTs) as a case study and apply machine learning methodologies to decipher contradictory results in the literature. The gradient boosting decision tree model demonstrates that cell density has a higher impact on cell proliferation than other obtainable experimental features in most publications. Together with the variation of other essential features, the controversy of cell proliferation trends on various TNTs is understandable. By traversing all combinational experimental features and the corresponding forecast using an exhausted grid search strategy, we find that adjusting cell density and sterilization methods can simultaneously induce opposite cell proliferation trends on various TNTs diameter, which is further validated by experiments. This case study reveals that machine learning is a burgeoning tool in deciphering controversial results in biomedical researches, opening up an avenue to explore the structure–property relationships of biomaterials. Oxford University Press 2021-06-21 /pmc/articles/PMC8218935/ /pubmed/34168893 http://dx.doi.org/10.1093/rb/rbab025 Text en © The Author(s) 2021. Published by Oxford University Press. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Shen, Ziao
Wang, Si
Shen, Zhenyu
Tang, Yufei
Xu, Junbin
Lin, Changjian
Chen, Xun
Huang, Qiaoling
Deciphering controversial results of cell proliferation on TiO(2) nanotubes using machine learning
title Deciphering controversial results of cell proliferation on TiO(2) nanotubes using machine learning
title_full Deciphering controversial results of cell proliferation on TiO(2) nanotubes using machine learning
title_fullStr Deciphering controversial results of cell proliferation on TiO(2) nanotubes using machine learning
title_full_unstemmed Deciphering controversial results of cell proliferation on TiO(2) nanotubes using machine learning
title_short Deciphering controversial results of cell proliferation on TiO(2) nanotubes using machine learning
title_sort deciphering controversial results of cell proliferation on tio(2) nanotubes using machine learning
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8218935/
https://www.ncbi.nlm.nih.gov/pubmed/34168893
http://dx.doi.org/10.1093/rb/rbab025
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