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Metrics to relate COVID-19 wastewater data to clinical testing dynamics
Wastewater surveillance has emerged as a useful tool in the public health response to the COVID-19 pandemic. While wastewater surveillance has been applied at various scales to monitor population-level COVID-19 dynamics, there is a need for quantitative metrics to interpret wastewater data in the co...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Cold Spring Harbor Laboratory
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8219106/ https://www.ncbi.nlm.nih.gov/pubmed/34159339 http://dx.doi.org/10.1101/2021.06.10.21258580 |
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author | Xiao, Amy Wu, Fuqing Bushman, Mary Zhang, Jianbo Imakaev, Maxim Chai, Peter R Duvallet, Claire Endo, Noriko Erickson, Timothy B Armas, Federica Arnold, Brian Chen, Hongjie Chandra, Franciscus Ghaeli, Newsha Gu, Xiaoqiong Hanage, William P Lee, Wei Lin Matus, Mariana McElroy, Kyle A Moniz, Katya Rhode, Steven F Thompson, Janelle Alm, Eric J |
author_facet | Xiao, Amy Wu, Fuqing Bushman, Mary Zhang, Jianbo Imakaev, Maxim Chai, Peter R Duvallet, Claire Endo, Noriko Erickson, Timothy B Armas, Federica Arnold, Brian Chen, Hongjie Chandra, Franciscus Ghaeli, Newsha Gu, Xiaoqiong Hanage, William P Lee, Wei Lin Matus, Mariana McElroy, Kyle A Moniz, Katya Rhode, Steven F Thompson, Janelle Alm, Eric J |
author_sort | Xiao, Amy |
collection | PubMed |
description | Wastewater surveillance has emerged as a useful tool in the public health response to the COVID-19 pandemic. While wastewater surveillance has been applied at various scales to monitor population-level COVID-19 dynamics, there is a need for quantitative metrics to interpret wastewater data in the context of public health trends. We collected 24-hour composite wastewater samples from March 2020 through May 2021 from a Massachusetts wastewater treatment plant and measured SARS-CoV-2 RNA concentrations using RT-qPCR. We show that the relationship between wastewater viral titers and COVID-19 clinical cases and deaths varies over time. We demonstrate the utility of three new metrics to monitor changes in COVID-19 epidemiology: (1) the ratio between wastewater viral titers and clinical cases (WC ratio), (2) the time lag between wastewater and clinical reporting, and (3) a transfer function between the wastewater and clinical case curves. We find that the WC ratio increases after key events, providing insight into the balance between disease spread and public health response. We also find that wastewater data preceded clinically reported cases in the first wave of the pandemic but did not serve as a leading indicator in the second wave, likely due to increased testing capacity. These three metrics could complement a framework for integrating wastewater surveillance into the public health response to the COVID-19 pandemic and future pandemics. |
format | Online Article Text |
id | pubmed-8219106 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Cold Spring Harbor Laboratory |
record_format | MEDLINE/PubMed |
spelling | pubmed-82191062021-06-23 Metrics to relate COVID-19 wastewater data to clinical testing dynamics Xiao, Amy Wu, Fuqing Bushman, Mary Zhang, Jianbo Imakaev, Maxim Chai, Peter R Duvallet, Claire Endo, Noriko Erickson, Timothy B Armas, Federica Arnold, Brian Chen, Hongjie Chandra, Franciscus Ghaeli, Newsha Gu, Xiaoqiong Hanage, William P Lee, Wei Lin Matus, Mariana McElroy, Kyle A Moniz, Katya Rhode, Steven F Thompson, Janelle Alm, Eric J medRxiv Article Wastewater surveillance has emerged as a useful tool in the public health response to the COVID-19 pandemic. While wastewater surveillance has been applied at various scales to monitor population-level COVID-19 dynamics, there is a need for quantitative metrics to interpret wastewater data in the context of public health trends. We collected 24-hour composite wastewater samples from March 2020 through May 2021 from a Massachusetts wastewater treatment plant and measured SARS-CoV-2 RNA concentrations using RT-qPCR. We show that the relationship between wastewater viral titers and COVID-19 clinical cases and deaths varies over time. We demonstrate the utility of three new metrics to monitor changes in COVID-19 epidemiology: (1) the ratio between wastewater viral titers and clinical cases (WC ratio), (2) the time lag between wastewater and clinical reporting, and (3) a transfer function between the wastewater and clinical case curves. We find that the WC ratio increases after key events, providing insight into the balance between disease spread and public health response. We also find that wastewater data preceded clinically reported cases in the first wave of the pandemic but did not serve as a leading indicator in the second wave, likely due to increased testing capacity. These three metrics could complement a framework for integrating wastewater surveillance into the public health response to the COVID-19 pandemic and future pandemics. Cold Spring Harbor Laboratory 2021-06-16 /pmc/articles/PMC8219106/ /pubmed/34159339 http://dx.doi.org/10.1101/2021.06.10.21258580 Text en https://creativecommons.org/licenses/by-nc-nd/4.0/This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which allows reusers to copy and distribute the material in any medium or format in unadapted form only, for noncommercial purposes only, and only so long as attribution is given to the creator. |
spellingShingle | Article Xiao, Amy Wu, Fuqing Bushman, Mary Zhang, Jianbo Imakaev, Maxim Chai, Peter R Duvallet, Claire Endo, Noriko Erickson, Timothy B Armas, Federica Arnold, Brian Chen, Hongjie Chandra, Franciscus Ghaeli, Newsha Gu, Xiaoqiong Hanage, William P Lee, Wei Lin Matus, Mariana McElroy, Kyle A Moniz, Katya Rhode, Steven F Thompson, Janelle Alm, Eric J Metrics to relate COVID-19 wastewater data to clinical testing dynamics |
title | Metrics to relate COVID-19 wastewater data to clinical testing dynamics |
title_full | Metrics to relate COVID-19 wastewater data to clinical testing dynamics |
title_fullStr | Metrics to relate COVID-19 wastewater data to clinical testing dynamics |
title_full_unstemmed | Metrics to relate COVID-19 wastewater data to clinical testing dynamics |
title_short | Metrics to relate COVID-19 wastewater data to clinical testing dynamics |
title_sort | metrics to relate covid-19 wastewater data to clinical testing dynamics |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8219106/ https://www.ncbi.nlm.nih.gov/pubmed/34159339 http://dx.doi.org/10.1101/2021.06.10.21258580 |
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