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Identifying and characterizing different stages toward Alzheimer's disease using ordered core features and machine learning
Based on the joint HCPMMP parcellation method we developed before, which divides the cortical brain into 360 regions, the concept of ordered core features (OCF) is first proposed to reveal the functional brain connectivity relationship among different cohorts of Alzheimer's disease (AD), late m...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8220177/ https://www.ncbi.nlm.nih.gov/pubmed/34189320 http://dx.doi.org/10.1016/j.heliyon.2021.e07287 |
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author | Sheng, Jinhua Wang, Bocheng Zhang, Qiao Zhou, Rougang Wang, Luyun Xin, Yu |
author_facet | Sheng, Jinhua Wang, Bocheng Zhang, Qiao Zhou, Rougang Wang, Luyun Xin, Yu |
author_sort | Sheng, Jinhua |
collection | PubMed |
description | Based on the joint HCPMMP parcellation method we developed before, which divides the cortical brain into 360 regions, the concept of ordered core features (OCF) is first proposed to reveal the functional brain connectivity relationship among different cohorts of Alzheimer's disease (AD), late mild cognitive impairment (LMCI), early mild cognitive impairment (EMCI) and healthy controls (HC). A set of core network features that change significantly under the specifically progressive relationship were extracted and used as supervised machine learning classifiers. The network nodes in this set mainly locate in the frontal lobe and insular, forming a narrow band, which are responsible for cognitive impairment as suggested by previous finding. By using these features, the accuracy ranged from 86.0% to 95.5% in binary classification between any pair of cohorts, higher than 70.1%–91.0% when using all network features. In multi-group classification, the average accuracy was 75% or 78% for HC, EMCI, LMCI or EMCI, LMCI, AD against baseline of 33%, and 53.3% for HC, EMCI, LMCI and AD against baseline of 25%. In addition, the recognition rate was lower when combining EMCI and LMCI patients into one group of mild cognitive impairment (MCI) for classification, suggesting that there exists a big difference between early and late MCI patients. This finding supports the EMCI/LMCI inclusion criteria introduced by ADNI based on neuropsychological assessments. |
format | Online Article Text |
id | pubmed-8220177 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-82201772021-06-28 Identifying and characterizing different stages toward Alzheimer's disease using ordered core features and machine learning Sheng, Jinhua Wang, Bocheng Zhang, Qiao Zhou, Rougang Wang, Luyun Xin, Yu Heliyon Research Article Based on the joint HCPMMP parcellation method we developed before, which divides the cortical brain into 360 regions, the concept of ordered core features (OCF) is first proposed to reveal the functional brain connectivity relationship among different cohorts of Alzheimer's disease (AD), late mild cognitive impairment (LMCI), early mild cognitive impairment (EMCI) and healthy controls (HC). A set of core network features that change significantly under the specifically progressive relationship were extracted and used as supervised machine learning classifiers. The network nodes in this set mainly locate in the frontal lobe and insular, forming a narrow band, which are responsible for cognitive impairment as suggested by previous finding. By using these features, the accuracy ranged from 86.0% to 95.5% in binary classification between any pair of cohorts, higher than 70.1%–91.0% when using all network features. In multi-group classification, the average accuracy was 75% or 78% for HC, EMCI, LMCI or EMCI, LMCI, AD against baseline of 33%, and 53.3% for HC, EMCI, LMCI and AD against baseline of 25%. In addition, the recognition rate was lower when combining EMCI and LMCI patients into one group of mild cognitive impairment (MCI) for classification, suggesting that there exists a big difference between early and late MCI patients. This finding supports the EMCI/LMCI inclusion criteria introduced by ADNI based on neuropsychological assessments. Elsevier 2021-06-11 /pmc/articles/PMC8220177/ /pubmed/34189320 http://dx.doi.org/10.1016/j.heliyon.2021.e07287 Text en © 2021 The Author(s) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Research Article Sheng, Jinhua Wang, Bocheng Zhang, Qiao Zhou, Rougang Wang, Luyun Xin, Yu Identifying and characterizing different stages toward Alzheimer's disease using ordered core features and machine learning |
title | Identifying and characterizing different stages toward Alzheimer's disease using ordered core features and machine learning |
title_full | Identifying and characterizing different stages toward Alzheimer's disease using ordered core features and machine learning |
title_fullStr | Identifying and characterizing different stages toward Alzheimer's disease using ordered core features and machine learning |
title_full_unstemmed | Identifying and characterizing different stages toward Alzheimer's disease using ordered core features and machine learning |
title_short | Identifying and characterizing different stages toward Alzheimer's disease using ordered core features and machine learning |
title_sort | identifying and characterizing different stages toward alzheimer's disease using ordered core features and machine learning |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8220177/ https://www.ncbi.nlm.nih.gov/pubmed/34189320 http://dx.doi.org/10.1016/j.heliyon.2021.e07287 |
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