Cargando…

A draft reference assembly of the Psilocybe cubensis genome

We describe the use of high-fidelity single molecule sequencing to assemble the genome of the psychoactive Psilocybe cubensis mushroom. The genome is 46.6Mb, 46% GC, and in 32 contigs with an N50 of 3.3Mb. The BUSCO completeness scores are 97.6% with 1.2% duplicates. The Psilocybin synthesis cluster...

Descripción completa

Detalles Bibliográficos
Autores principales:	McKernan, Kevin, Kane, Liam T., Crawford, Seth, Chin, Chen-Shan, Trippe, Aaron, McLaughlin, Stephen
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	F1000 Research Limited 2021
Materias:	Data Note
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8220353/ https://www.ncbi.nlm.nih.gov/pubmed/34322225 http://dx.doi.org/10.12688/f1000research.51613.2

Ejemplares similares

Acute renal injury cause by confirmed Psilocybe cubensis mushroom ingestion
por: Austin, Emily, et al.
Publicado: (2018)

Multi-locus identification of Psilocybe cubensis by high-resolution melting (HRM)
por: Zhang, Xiaochun, et al.
Publicado: (2021)

Effects and safety of Psilocybe cubensis and Panaeolus cyanescens magic mushroom extracts on endothelin-1-induced hypertrophy and cell injury in cardiomyocytes
por: Nkadimeng, Sanah M., et al.
Publicado: (2020)

A draft genome assembly of the Chinese sillago (Sillago sinica), the first reference genome for Sillaginidae fishes
por: Xu, Shengyong, et al.
Publicado: (2018)

Whole genome sequencing of colonies derived from cannabis flowers and the impact of media selection on benchmarking total yeast and mold detection tools
por: McKernan, Kevin, et al.
Publicado: (2021)

Discovery of a new caerulescent Psilocybe mushroom in Germany: Psilocybe germanica sp.nov.
por: Gartz, Jochen, et al.
Publicado: (2015)

De novo assembly of the cattle reference genome with single-molecule sequencing
por: Rosen, Benjamin D, et al.
Publicado: (2020)

The draft nuclear genome assembly of Eucalyptus pauciflora: a pipeline for comparing de novo assemblies
por: Wang, Weiwen, et al.
Publicado: (2020)

The draft genome assembly of Rhododendron delavayi Franch. var. delavayi
por: Zhang, Lu, et al.
Publicado: (2017)

Draft genome assembly of the invasive cane toad, Rhinella marina
por: Edwards, Richard J, et al.
Publicado: (2018)

Draft genome assembly of the biofuel grass crop Miscanthus sacchariflorus
por: De Vega, Jose, et al.
Publicado: (2021)

A draft nuclear-genome assembly of the acoel flatworm Praesagittifera naikaiensis
por: Arimoto, Asuka, et al.
Publicado: (2019)

Genetic Survey of Psilocybe Natural Products
por: Dörner, Sebastian, et al.
Publicado: (2022)

Draft genome assembly and transcriptome sequencing of the golden algae Hydrurus foetidus (Chrysophyceae)
por: Bråte, Jon, et al.
Publicado: (2019)

Alignment of 1000 Genomes Project reads to reference assembly GRCh38
por: Zheng-Bradley, Xiangqun, et al.
Publicado: (2017)

Long-read assembly of the Brassica napus reference genome Darmor-bzh
por: Rousseau-Gueutin, Mathieu, et al.
Publicado: (2020)

Draft genome assembly of Passalora sequoiae a needle blight pathogen on Leyland cypress
por: Copes, Warren E., et al.
Publicado: (2020)

Construction of a chromosome-scale long-read reference genome assembly for potato
por: Pham, Gina M, et al.
Publicado: (2020)

Diversidad de género Psilocybe en Veracruz :
por: Pérez Hernández, Julio César
Publicado: (2007)

High-quality chromosome-scale assembly of the walnut (Juglans regia L.) reference genome
por: Marrano, Annarita, et al.
Publicado: (2020)

An improved ovine reference genome assembly to facilitate in-depth functional annotation of the sheep genome
por: Davenport, Kimberly M, et al.
Publicado: (2022)

Seed Transmission of Pseudoperonospora cubensis
por: Cohen, Yigal, et al.
Publicado: (2014)

Draft genome assembly of the Bengalese finch, Lonchura striata domestica, a model for motor skill variability and learning
por: Colquitt, Bradley M, et al.
Publicado: (2018)

A new Plasmodium vivax reference sequence with improved assembly of the subtelomeres reveals an abundance of pir genes
por: Auburn, Sarah, et al.
Publicado: (2016)

High-quality assembly of the reference genome for scarlet sage, Salvia splendens, an economically important ornamental plant
por: Dong, Ai-Xiang, et al.
Publicado: (2018)

Genomic resources and draft assemblies of the human and porcine varieties of scabies mites, Sarcoptes scabiei var. hominis and var. suis
por: Mofiz, Ehtesham, et al.
Publicado: (2016)

Construction of a new chromosome-scale, long-read reference genome assembly for the Syrian hamster, Mesocricetus auratus
por: Harris, R Alan, et al.
Publicado: (2022)

Injury‐Triggered Blueing Reactions of Psilocybe “Magic” Mushrooms
por: Lenz, Claudius, et al.
Publicado: (2019)

A draft genome assembly of halophyte Suaeda aralocaspica, a plant that performs C(4) photosynthesis within individual cells
por: Wang, Lei, et al.
Publicado: (2019)

PacBio long read-assembled draft genome of Pythium insidiosum strain Pi-S isolated from a Thai patient with pythiosis
por: Krajaejun, Theerapong, et al.
Publicado: (2023)

Draft genome of the gayal, Bos frontalis
por: Wang, Ming-Shan, et al.
Publicado: (2017)

Draft genome assemblies using sequencing reads from Oxford Nanopore Technology and Illumina platforms for four species of North American Fundulus killifish
por: Johnson, Lisa K, et al.
Publicado: (2020)

Draft genome sequence data of Clostridium perfringens FA isolated from the faecal material of the critically endangered African wild dog, Lycaon pictus
por: Sanchez, Fatima Aguilar, et al.
Publicado: (2022)

Chromosome-scale assembly comparison of the Korean Reference Genome KOREF from PromethION and PacBio with Hi-C mapping information
por: Kim, Hui-Su, et al.
Publicado: (2019)

Co-Occurrence of Two Phylogenetic Clades of Pseudoperonospora cubensis, the Causal Agent of Downy Mildew Disease, on Oriental Pickling Melon
por: Lee, Dong Jae, et al.
Publicado: (2021)

The draft genome of Labeo catla
por: Sahoo, Lakshman, et al.
Publicado: (2020)

A chromosome-scale assembly of the major African malaria vector Anopheles funestus
por: Ghurye, Jay, et al.
Publicado: (2019)

The genome draft of coconut (Cocos nucifera)
por: Xiao, Yong, et al.
Publicado: (2017)

Draft genome of the reindeer (Rangifer tarandus)
por: Li, Zhipeng, et al.
Publicado: (2017)

Draft genome of the milu (Elaphurus davidianus)
por: Zhang, Chenzhou, et al.
Publicado: (2017)

Cannot write session to /tmp/vufind_sessions/sess_755ovl6el0t57vmi7t67f30b9m