Cargando…
Single-cell RNA sequencing of human femoral head in vivo
The homeostasis of bone metabolism depends on the coupling and precise regulation of various types of cells in bone tissue. However, the communication and interaction between bone tissue cells at the single-cell level remains poorly understood. Thus, we performed single-cell RNA sequencing (scRNA-se...
Autores principales: | , , , , , , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8221309/ https://www.ncbi.nlm.nih.gov/pubmed/34111027 http://dx.doi.org/10.18632/aging.203124 |
_version_ | 1783711303897972736 |
---|---|
author | Qiu, Xiang Liu, Ying Shen, Hui Wang, Zun Gong, Yun Yang, Junxiao Li, Xiaohua Zhang, Huixi Chen, Yu Zhou, Cui Lv, Wanqiang Cheng, Liang Hu, Yihe Li, Boyang Shen, Wendi Zhu, Xuezhen Tan, Li-Jun Xiao, Hong-Mei Deng, Hong-Wen |
author_facet | Qiu, Xiang Liu, Ying Shen, Hui Wang, Zun Gong, Yun Yang, Junxiao Li, Xiaohua Zhang, Huixi Chen, Yu Zhou, Cui Lv, Wanqiang Cheng, Liang Hu, Yihe Li, Boyang Shen, Wendi Zhu, Xuezhen Tan, Li-Jun Xiao, Hong-Mei Deng, Hong-Wen |
author_sort | Qiu, Xiang |
collection | PubMed |
description | The homeostasis of bone metabolism depends on the coupling and precise regulation of various types of cells in bone tissue. However, the communication and interaction between bone tissue cells at the single-cell level remains poorly understood. Thus, we performed single-cell RNA sequencing (scRNA-seq) on the primary human femoral head tissue cells (FHTCs). Nine cell types were identified in 26,574 primary human FHTCs, including granulocytes, T cells, monocytes, B cells, red blood cells, osteoblastic lineage cells, endothelial cells, endothelial progenitor cells (EPCs) and plasmacytoid dendritic cells. We identified serine protease 23 (PRSS23) and matrix remodeling associated protein 8 (MXRA8) as novel bone metabolism-related genes. Additionally, we found that several subtypes of monocytes, T cells and B cells were related to bone metabolism. Cell-cell communication analysis showed that collagen, chemokine, transforming growth factor and their ligands have significant roles in the crosstalks between FHTCs. In particular, EPCs communicated with osteoblastic lineage cells closely via the "COL2A1-ITGB1" interaction pair. Collectively, this study provided an initial characterization of the cellular composition of the human FHTCs and the complex crosstalks between them at the single-cell level. It is a unique starting resource for in-depth insights into bone metabolism. |
format | Online Article Text |
id | pubmed-8221309 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Impact Journals |
record_format | MEDLINE/PubMed |
spelling | pubmed-82213092021-06-26 Single-cell RNA sequencing of human femoral head in vivo Qiu, Xiang Liu, Ying Shen, Hui Wang, Zun Gong, Yun Yang, Junxiao Li, Xiaohua Zhang, Huixi Chen, Yu Zhou, Cui Lv, Wanqiang Cheng, Liang Hu, Yihe Li, Boyang Shen, Wendi Zhu, Xuezhen Tan, Li-Jun Xiao, Hong-Mei Deng, Hong-Wen Aging (Albany NY) Research Paper The homeostasis of bone metabolism depends on the coupling and precise regulation of various types of cells in bone tissue. However, the communication and interaction between bone tissue cells at the single-cell level remains poorly understood. Thus, we performed single-cell RNA sequencing (scRNA-seq) on the primary human femoral head tissue cells (FHTCs). Nine cell types were identified in 26,574 primary human FHTCs, including granulocytes, T cells, monocytes, B cells, red blood cells, osteoblastic lineage cells, endothelial cells, endothelial progenitor cells (EPCs) and plasmacytoid dendritic cells. We identified serine protease 23 (PRSS23) and matrix remodeling associated protein 8 (MXRA8) as novel bone metabolism-related genes. Additionally, we found that several subtypes of monocytes, T cells and B cells were related to bone metabolism. Cell-cell communication analysis showed that collagen, chemokine, transforming growth factor and their ligands have significant roles in the crosstalks between FHTCs. In particular, EPCs communicated with osteoblastic lineage cells closely via the "COL2A1-ITGB1" interaction pair. Collectively, this study provided an initial characterization of the cellular composition of the human FHTCs and the complex crosstalks between them at the single-cell level. It is a unique starting resource for in-depth insights into bone metabolism. Impact Journals 2021-06-10 /pmc/articles/PMC8221309/ /pubmed/34111027 http://dx.doi.org/10.18632/aging.203124 Text en Copyright: © 2021 Qiu et al. https://creativecommons.org/licenses/by/3.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Qiu, Xiang Liu, Ying Shen, Hui Wang, Zun Gong, Yun Yang, Junxiao Li, Xiaohua Zhang, Huixi Chen, Yu Zhou, Cui Lv, Wanqiang Cheng, Liang Hu, Yihe Li, Boyang Shen, Wendi Zhu, Xuezhen Tan, Li-Jun Xiao, Hong-Mei Deng, Hong-Wen Single-cell RNA sequencing of human femoral head in vivo |
title | Single-cell RNA sequencing of human femoral head in vivo |
title_full | Single-cell RNA sequencing of human femoral head in vivo |
title_fullStr | Single-cell RNA sequencing of human femoral head in vivo |
title_full_unstemmed | Single-cell RNA sequencing of human femoral head in vivo |
title_short | Single-cell RNA sequencing of human femoral head in vivo |
title_sort | single-cell rna sequencing of human femoral head in vivo |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8221309/ https://www.ncbi.nlm.nih.gov/pubmed/34111027 http://dx.doi.org/10.18632/aging.203124 |
work_keys_str_mv | AT qiuxiang singlecellrnasequencingofhumanfemoralheadinvivo AT liuying singlecellrnasequencingofhumanfemoralheadinvivo AT shenhui singlecellrnasequencingofhumanfemoralheadinvivo AT wangzun singlecellrnasequencingofhumanfemoralheadinvivo AT gongyun singlecellrnasequencingofhumanfemoralheadinvivo AT yangjunxiao singlecellrnasequencingofhumanfemoralheadinvivo AT lixiaohua singlecellrnasequencingofhumanfemoralheadinvivo AT zhanghuixi singlecellrnasequencingofhumanfemoralheadinvivo AT chenyu singlecellrnasequencingofhumanfemoralheadinvivo AT zhoucui singlecellrnasequencingofhumanfemoralheadinvivo AT lvwanqiang singlecellrnasequencingofhumanfemoralheadinvivo AT chengliang singlecellrnasequencingofhumanfemoralheadinvivo AT huyihe singlecellrnasequencingofhumanfemoralheadinvivo AT liboyang singlecellrnasequencingofhumanfemoralheadinvivo AT shenwendi singlecellrnasequencingofhumanfemoralheadinvivo AT zhuxuezhen singlecellrnasequencingofhumanfemoralheadinvivo AT tanlijun singlecellrnasequencingofhumanfemoralheadinvivo AT xiaohongmei singlecellrnasequencingofhumanfemoralheadinvivo AT denghongwen singlecellrnasequencingofhumanfemoralheadinvivo |