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Rapid Detection of Pityophthorus juglandis (Blackman) (Coleoptera, Curculionidae) with the Loop-Mediated Isothermal Amplification (LAMP) Method

The walnut twig beetle Pityophthorus juglandis is a phloem-boring bark beetle responsible, in association with the ascomycete Geosmithia morbida, for the Thousand Cankers Disease (TCD) of walnut trees. The recent finding of TCD in Europe prompted the development of effective diagnostic protocols for...

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Autores principales: Rizzo, Domenico, Moricca, Salvatore, Bracalini, Matteo, Benigno, Alessandra, Bernardo, Umberto, Luchi, Nicola, Da Lio, Daniele, Nugnes, Francesco, Cappellini, Giovanni, Salemi, Chiara, Cacciola, Santa Olga, Panzavolta, Tiziana
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8224600/
https://www.ncbi.nlm.nih.gov/pubmed/34067342
http://dx.doi.org/10.3390/plants10061048
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author Rizzo, Domenico
Moricca, Salvatore
Bracalini, Matteo
Benigno, Alessandra
Bernardo, Umberto
Luchi, Nicola
Da Lio, Daniele
Nugnes, Francesco
Cappellini, Giovanni
Salemi, Chiara
Cacciola, Santa Olga
Panzavolta, Tiziana
author_facet Rizzo, Domenico
Moricca, Salvatore
Bracalini, Matteo
Benigno, Alessandra
Bernardo, Umberto
Luchi, Nicola
Da Lio, Daniele
Nugnes, Francesco
Cappellini, Giovanni
Salemi, Chiara
Cacciola, Santa Olga
Panzavolta, Tiziana
author_sort Rizzo, Domenico
collection PubMed
description The walnut twig beetle Pityophthorus juglandis is a phloem-boring bark beetle responsible, in association with the ascomycete Geosmithia morbida, for the Thousand Cankers Disease (TCD) of walnut trees. The recent finding of TCD in Europe prompted the development of effective diagnostic protocols for the early detection of members of this insect/fungus complex. Here we report the development of a highly efficient, low-cost, and rapid method for detecting the beetle, or even just its biological traces, from environmental samples: the loop-mediated isothermal amplification (LAMP) assay. The method, designed on the 28S ribosomal RNA gene, showed high specificity and sensitivity, with no cross reactivity to other bark beetles and wood-boring insects. The test was successful even with very small amounts of the target insect’s nucleic acid, with limit values of 0.64 pg/µL and 3.2 pg/µL for WTB adults and frass, respectively. A comparison of the method (both in real time and visual) with conventional PCR did not display significant differences in terms of LoD. This LAMP protocol will enable quick, low-cost, and early detection of P. juglandis in areas with new infestations and for phytosanitary inspections at vulnerable sites (e.g., seaports, airports, loading stations, storage facilities, and wood processing companies).
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spelling pubmed-82246002021-06-25 Rapid Detection of Pityophthorus juglandis (Blackman) (Coleoptera, Curculionidae) with the Loop-Mediated Isothermal Amplification (LAMP) Method Rizzo, Domenico Moricca, Salvatore Bracalini, Matteo Benigno, Alessandra Bernardo, Umberto Luchi, Nicola Da Lio, Daniele Nugnes, Francesco Cappellini, Giovanni Salemi, Chiara Cacciola, Santa Olga Panzavolta, Tiziana Plants (Basel) Article The walnut twig beetle Pityophthorus juglandis is a phloem-boring bark beetle responsible, in association with the ascomycete Geosmithia morbida, for the Thousand Cankers Disease (TCD) of walnut trees. The recent finding of TCD in Europe prompted the development of effective diagnostic protocols for the early detection of members of this insect/fungus complex. Here we report the development of a highly efficient, low-cost, and rapid method for detecting the beetle, or even just its biological traces, from environmental samples: the loop-mediated isothermal amplification (LAMP) assay. The method, designed on the 28S ribosomal RNA gene, showed high specificity and sensitivity, with no cross reactivity to other bark beetles and wood-boring insects. The test was successful even with very small amounts of the target insect’s nucleic acid, with limit values of 0.64 pg/µL and 3.2 pg/µL for WTB adults and frass, respectively. A comparison of the method (both in real time and visual) with conventional PCR did not display significant differences in terms of LoD. This LAMP protocol will enable quick, low-cost, and early detection of P. juglandis in areas with new infestations and for phytosanitary inspections at vulnerable sites (e.g., seaports, airports, loading stations, storage facilities, and wood processing companies). MDPI 2021-05-22 /pmc/articles/PMC8224600/ /pubmed/34067342 http://dx.doi.org/10.3390/plants10061048 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Rizzo, Domenico
Moricca, Salvatore
Bracalini, Matteo
Benigno, Alessandra
Bernardo, Umberto
Luchi, Nicola
Da Lio, Daniele
Nugnes, Francesco
Cappellini, Giovanni
Salemi, Chiara
Cacciola, Santa Olga
Panzavolta, Tiziana
Rapid Detection of Pityophthorus juglandis (Blackman) (Coleoptera, Curculionidae) with the Loop-Mediated Isothermal Amplification (LAMP) Method
title Rapid Detection of Pityophthorus juglandis (Blackman) (Coleoptera, Curculionidae) with the Loop-Mediated Isothermal Amplification (LAMP) Method
title_full Rapid Detection of Pityophthorus juglandis (Blackman) (Coleoptera, Curculionidae) with the Loop-Mediated Isothermal Amplification (LAMP) Method
title_fullStr Rapid Detection of Pityophthorus juglandis (Blackman) (Coleoptera, Curculionidae) with the Loop-Mediated Isothermal Amplification (LAMP) Method
title_full_unstemmed Rapid Detection of Pityophthorus juglandis (Blackman) (Coleoptera, Curculionidae) with the Loop-Mediated Isothermal Amplification (LAMP) Method
title_short Rapid Detection of Pityophthorus juglandis (Blackman) (Coleoptera, Curculionidae) with the Loop-Mediated Isothermal Amplification (LAMP) Method
title_sort rapid detection of pityophthorus juglandis (blackman) (coleoptera, curculionidae) with the loop-mediated isothermal amplification (lamp) method
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8224600/
https://www.ncbi.nlm.nih.gov/pubmed/34067342
http://dx.doi.org/10.3390/plants10061048
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