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An integrated risk and epidemiological model to estimate risk-stratified COVID-19 outcomes for Los Angeles County: March 1, 2020—March 1, 2021
The objective of this study was to use available data on the prevalence of COVID-19 risk factors in subpopulations and epidemic dynamics at the population level to estimate probabilities of severe illness and the case and infection fatality rates (CFR and IFR) stratified across subgroups representin...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8224896/ https://www.ncbi.nlm.nih.gov/pubmed/34166416 http://dx.doi.org/10.1371/journal.pone.0253549 |
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author | Horn, Abigail L. Jiang, Lai Washburn, Faith Hvitfeldt, Emil de la Haye, Kayla Nicholas, William Simon, Paul Pentz, Maryann Cozen, Wendy Sood, Neeraj Conti, David V. |
author_facet | Horn, Abigail L. Jiang, Lai Washburn, Faith Hvitfeldt, Emil de la Haye, Kayla Nicholas, William Simon, Paul Pentz, Maryann Cozen, Wendy Sood, Neeraj Conti, David V. |
author_sort | Horn, Abigail L. |
collection | PubMed |
description | The objective of this study was to use available data on the prevalence of COVID-19 risk factors in subpopulations and epidemic dynamics at the population level to estimate probabilities of severe illness and the case and infection fatality rates (CFR and IFR) stratified across subgroups representing all combinations of the risk factors age, comorbidities, obesity, and smoking status. We focus on the first year of the epidemic in Los Angeles County (LAC) (March 1, 2020–March 1, 2021), spanning three epidemic waves. A relative risk modeling approach was developed to estimate conditional effects from available marginal data. A dynamic stochastic epidemic model was developed to produce time-varying population estimates of epidemic parameters including the transmission and infection observation rate. The epidemic and risk models were integrated to produce estimates of subpopulation-stratified probabilities of disease progression and CFR and IFR for LAC. The probabilities of disease progression and CFR and IFR were found to vary as extensively between age groups as within age categories combined with the presence of absence of other risk factors, suggesting that it is inappropriate to summarize epidemiological parameters for age categories alone, let alone the entire population. The fine-grained subpopulation-stratified estimates of COVID-19 outcomes produced in this study are useful in understanding disparities in the effect of the epidemic on different groups in LAC, and can inform analyses of targeted subpopulation-level policy interventions. |
format | Online Article Text |
id | pubmed-8224896 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-82248962021-07-19 An integrated risk and epidemiological model to estimate risk-stratified COVID-19 outcomes for Los Angeles County: March 1, 2020—March 1, 2021 Horn, Abigail L. Jiang, Lai Washburn, Faith Hvitfeldt, Emil de la Haye, Kayla Nicholas, William Simon, Paul Pentz, Maryann Cozen, Wendy Sood, Neeraj Conti, David V. PLoS One Research Article The objective of this study was to use available data on the prevalence of COVID-19 risk factors in subpopulations and epidemic dynamics at the population level to estimate probabilities of severe illness and the case and infection fatality rates (CFR and IFR) stratified across subgroups representing all combinations of the risk factors age, comorbidities, obesity, and smoking status. We focus on the first year of the epidemic in Los Angeles County (LAC) (March 1, 2020–March 1, 2021), spanning three epidemic waves. A relative risk modeling approach was developed to estimate conditional effects from available marginal data. A dynamic stochastic epidemic model was developed to produce time-varying population estimates of epidemic parameters including the transmission and infection observation rate. The epidemic and risk models were integrated to produce estimates of subpopulation-stratified probabilities of disease progression and CFR and IFR for LAC. The probabilities of disease progression and CFR and IFR were found to vary as extensively between age groups as within age categories combined with the presence of absence of other risk factors, suggesting that it is inappropriate to summarize epidemiological parameters for age categories alone, let alone the entire population. The fine-grained subpopulation-stratified estimates of COVID-19 outcomes produced in this study are useful in understanding disparities in the effect of the epidemic on different groups in LAC, and can inform analyses of targeted subpopulation-level policy interventions. Public Library of Science 2021-06-24 /pmc/articles/PMC8224896/ /pubmed/34166416 http://dx.doi.org/10.1371/journal.pone.0253549 Text en © 2021 Horn et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Horn, Abigail L. Jiang, Lai Washburn, Faith Hvitfeldt, Emil de la Haye, Kayla Nicholas, William Simon, Paul Pentz, Maryann Cozen, Wendy Sood, Neeraj Conti, David V. An integrated risk and epidemiological model to estimate risk-stratified COVID-19 outcomes for Los Angeles County: March 1, 2020—March 1, 2021 |
title | An integrated risk and epidemiological model to estimate risk-stratified COVID-19 outcomes for Los Angeles County: March 1, 2020—March 1, 2021 |
title_full | An integrated risk and epidemiological model to estimate risk-stratified COVID-19 outcomes for Los Angeles County: March 1, 2020—March 1, 2021 |
title_fullStr | An integrated risk and epidemiological model to estimate risk-stratified COVID-19 outcomes for Los Angeles County: March 1, 2020—March 1, 2021 |
title_full_unstemmed | An integrated risk and epidemiological model to estimate risk-stratified COVID-19 outcomes for Los Angeles County: March 1, 2020—March 1, 2021 |
title_short | An integrated risk and epidemiological model to estimate risk-stratified COVID-19 outcomes for Los Angeles County: March 1, 2020—March 1, 2021 |
title_sort | integrated risk and epidemiological model to estimate risk-stratified covid-19 outcomes for los angeles county: march 1, 2020—march 1, 2021 |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8224896/ https://www.ncbi.nlm.nih.gov/pubmed/34166416 http://dx.doi.org/10.1371/journal.pone.0253549 |
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