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An integrated risk and epidemiological model to estimate risk-stratified COVID-19 outcomes for Los Angeles County: March 1, 2020—March 1, 2021

The objective of this study was to use available data on the prevalence of COVID-19 risk factors in subpopulations and epidemic dynamics at the population level to estimate probabilities of severe illness and the case and infection fatality rates (CFR and IFR) stratified across subgroups representin...

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Autores principales: Horn, Abigail L., Jiang, Lai, Washburn, Faith, Hvitfeldt, Emil, de la Haye, Kayla, Nicholas, William, Simon, Paul, Pentz, Maryann, Cozen, Wendy, Sood, Neeraj, Conti, David V.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8224896/
https://www.ncbi.nlm.nih.gov/pubmed/34166416
http://dx.doi.org/10.1371/journal.pone.0253549
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author Horn, Abigail L.
Jiang, Lai
Washburn, Faith
Hvitfeldt, Emil
de la Haye, Kayla
Nicholas, William
Simon, Paul
Pentz, Maryann
Cozen, Wendy
Sood, Neeraj
Conti, David V.
author_facet Horn, Abigail L.
Jiang, Lai
Washburn, Faith
Hvitfeldt, Emil
de la Haye, Kayla
Nicholas, William
Simon, Paul
Pentz, Maryann
Cozen, Wendy
Sood, Neeraj
Conti, David V.
author_sort Horn, Abigail L.
collection PubMed
description The objective of this study was to use available data on the prevalence of COVID-19 risk factors in subpopulations and epidemic dynamics at the population level to estimate probabilities of severe illness and the case and infection fatality rates (CFR and IFR) stratified across subgroups representing all combinations of the risk factors age, comorbidities, obesity, and smoking status. We focus on the first year of the epidemic in Los Angeles County (LAC) (March 1, 2020–March 1, 2021), spanning three epidemic waves. A relative risk modeling approach was developed to estimate conditional effects from available marginal data. A dynamic stochastic epidemic model was developed to produce time-varying population estimates of epidemic parameters including the transmission and infection observation rate. The epidemic and risk models were integrated to produce estimates of subpopulation-stratified probabilities of disease progression and CFR and IFR for LAC. The probabilities of disease progression and CFR and IFR were found to vary as extensively between age groups as within age categories combined with the presence of absence of other risk factors, suggesting that it is inappropriate to summarize epidemiological parameters for age categories alone, let alone the entire population. The fine-grained subpopulation-stratified estimates of COVID-19 outcomes produced in this study are useful in understanding disparities in the effect of the epidemic on different groups in LAC, and can inform analyses of targeted subpopulation-level policy interventions.
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spelling pubmed-82248962021-07-19 An integrated risk and epidemiological model to estimate risk-stratified COVID-19 outcomes for Los Angeles County: March 1, 2020—March 1, 2021 Horn, Abigail L. Jiang, Lai Washburn, Faith Hvitfeldt, Emil de la Haye, Kayla Nicholas, William Simon, Paul Pentz, Maryann Cozen, Wendy Sood, Neeraj Conti, David V. PLoS One Research Article The objective of this study was to use available data on the prevalence of COVID-19 risk factors in subpopulations and epidemic dynamics at the population level to estimate probabilities of severe illness and the case and infection fatality rates (CFR and IFR) stratified across subgroups representing all combinations of the risk factors age, comorbidities, obesity, and smoking status. We focus on the first year of the epidemic in Los Angeles County (LAC) (March 1, 2020–March 1, 2021), spanning three epidemic waves. A relative risk modeling approach was developed to estimate conditional effects from available marginal data. A dynamic stochastic epidemic model was developed to produce time-varying population estimates of epidemic parameters including the transmission and infection observation rate. The epidemic and risk models were integrated to produce estimates of subpopulation-stratified probabilities of disease progression and CFR and IFR for LAC. The probabilities of disease progression and CFR and IFR were found to vary as extensively between age groups as within age categories combined with the presence of absence of other risk factors, suggesting that it is inappropriate to summarize epidemiological parameters for age categories alone, let alone the entire population. The fine-grained subpopulation-stratified estimates of COVID-19 outcomes produced in this study are useful in understanding disparities in the effect of the epidemic on different groups in LAC, and can inform analyses of targeted subpopulation-level policy interventions. Public Library of Science 2021-06-24 /pmc/articles/PMC8224896/ /pubmed/34166416 http://dx.doi.org/10.1371/journal.pone.0253549 Text en © 2021 Horn et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Horn, Abigail L.
Jiang, Lai
Washburn, Faith
Hvitfeldt, Emil
de la Haye, Kayla
Nicholas, William
Simon, Paul
Pentz, Maryann
Cozen, Wendy
Sood, Neeraj
Conti, David V.
An integrated risk and epidemiological model to estimate risk-stratified COVID-19 outcomes for Los Angeles County: March 1, 2020—March 1, 2021
title An integrated risk and epidemiological model to estimate risk-stratified COVID-19 outcomes for Los Angeles County: March 1, 2020—March 1, 2021
title_full An integrated risk and epidemiological model to estimate risk-stratified COVID-19 outcomes for Los Angeles County: March 1, 2020—March 1, 2021
title_fullStr An integrated risk and epidemiological model to estimate risk-stratified COVID-19 outcomes for Los Angeles County: March 1, 2020—March 1, 2021
title_full_unstemmed An integrated risk and epidemiological model to estimate risk-stratified COVID-19 outcomes for Los Angeles County: March 1, 2020—March 1, 2021
title_short An integrated risk and epidemiological model to estimate risk-stratified COVID-19 outcomes for Los Angeles County: March 1, 2020—March 1, 2021
title_sort integrated risk and epidemiological model to estimate risk-stratified covid-19 outcomes for los angeles county: march 1, 2020—march 1, 2021
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8224896/
https://www.ncbi.nlm.nih.gov/pubmed/34166416
http://dx.doi.org/10.1371/journal.pone.0253549
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