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Investigating a Selection of Methods for the Prediction of Total Soluble Solids Among Wine Grape Quality Characteristics Using Normalized Difference Vegetation Index Data From Proximal and Remote Sensing

The most common method for determining wine grape quality characteristics is to perform sample-based laboratory analysis, which can be time-consuming and expensive. In this article, we investigate an alternative approach to predict wine grape quality characteristics by combining machine learning tec...

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Autores principales: Kasimati, Aikaterini, Espejo-Garcia, Borja, Vali, Eleanna, Malounas, Ioannis, Fountas, Spyros
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8226266/
https://www.ncbi.nlm.nih.gov/pubmed/34178002
http://dx.doi.org/10.3389/fpls.2021.683078
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author Kasimati, Aikaterini
Espejo-Garcia, Borja
Vali, Eleanna
Malounas, Ioannis
Fountas, Spyros
author_facet Kasimati, Aikaterini
Espejo-Garcia, Borja
Vali, Eleanna
Malounas, Ioannis
Fountas, Spyros
author_sort Kasimati, Aikaterini
collection PubMed
description The most common method for determining wine grape quality characteristics is to perform sample-based laboratory analysis, which can be time-consuming and expensive. In this article, we investigate an alternative approach to predict wine grape quality characteristics by combining machine learning techniques and normalized difference vegetation index (NDVI) data collected at different growth stages with non-destructive methods, such as proximal and remote sensing, that are currently used in precision viticulture (PV). The study involved several sets of high-resolution multispectral data derived from four sources, including two vehicle-mounted crop reflectance sensors, unmanned aerial vehicle (UAV)-acquired data, and Sentinel-2 (S2) archived imagery to estimate grapevine canopy properties at different growth stages. Several data pre-processing techniques were employed, including data quality assessment, data interpolation onto a 100-cell grid (10 × 20 m), and data normalization. By calculating Pearson’s correlation matrix between all variables, initial descriptive statistical analysis was carried out to investigate the relationships between NDVI data from all proximal and remote sensors and the grape quality characteristics in all growth stages. The transformed dataset was then ready and applied to statistical and machine learning algorithms, firstly trained on the data distribution available and then validated and tested, using linear and nonlinear regression models, including ordinary least square (OLS), Theil–Sen, and the Huber regression models and Ensemble Methods based on Decision Trees. Proximal sensors performed better in wine grapes quality parameters prediction in the early season, while remote sensors during later growth stages. The strongest correlations with the sugar content were observed for NDVI data collected with the UAV, Spectrosense+GPS (SS), and the CropCircle (CC), during Berries pea-sized and the Veraison stage, mid-late season with full canopy growth, for both years. UAV and SS data proved to be more accurate in predicting the sugars out of all wine grape quality characteristics, especially during a mid-late season with full canopy growth, in Berries pea-sized and the Veraison growth stages. The best-fitted regressions presented a maximum coefficient of determination (R(2)) of 0.61.
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spelling pubmed-82262662021-06-26 Investigating a Selection of Methods for the Prediction of Total Soluble Solids Among Wine Grape Quality Characteristics Using Normalized Difference Vegetation Index Data From Proximal and Remote Sensing Kasimati, Aikaterini Espejo-Garcia, Borja Vali, Eleanna Malounas, Ioannis Fountas, Spyros Front Plant Sci Plant Science The most common method for determining wine grape quality characteristics is to perform sample-based laboratory analysis, which can be time-consuming and expensive. In this article, we investigate an alternative approach to predict wine grape quality characteristics by combining machine learning techniques and normalized difference vegetation index (NDVI) data collected at different growth stages with non-destructive methods, such as proximal and remote sensing, that are currently used in precision viticulture (PV). The study involved several sets of high-resolution multispectral data derived from four sources, including two vehicle-mounted crop reflectance sensors, unmanned aerial vehicle (UAV)-acquired data, and Sentinel-2 (S2) archived imagery to estimate grapevine canopy properties at different growth stages. Several data pre-processing techniques were employed, including data quality assessment, data interpolation onto a 100-cell grid (10 × 20 m), and data normalization. By calculating Pearson’s correlation matrix between all variables, initial descriptive statistical analysis was carried out to investigate the relationships between NDVI data from all proximal and remote sensors and the grape quality characteristics in all growth stages. The transformed dataset was then ready and applied to statistical and machine learning algorithms, firstly trained on the data distribution available and then validated and tested, using linear and nonlinear regression models, including ordinary least square (OLS), Theil–Sen, and the Huber regression models and Ensemble Methods based on Decision Trees. Proximal sensors performed better in wine grapes quality parameters prediction in the early season, while remote sensors during later growth stages. The strongest correlations with the sugar content were observed for NDVI data collected with the UAV, Spectrosense+GPS (SS), and the CropCircle (CC), during Berries pea-sized and the Veraison stage, mid-late season with full canopy growth, for both years. UAV and SS data proved to be more accurate in predicting the sugars out of all wine grape quality characteristics, especially during a mid-late season with full canopy growth, in Berries pea-sized and the Veraison growth stages. The best-fitted regressions presented a maximum coefficient of determination (R(2)) of 0.61. Frontiers Media S.A. 2021-06-11 /pmc/articles/PMC8226266/ /pubmed/34178002 http://dx.doi.org/10.3389/fpls.2021.683078 Text en Copyright © 2021 Kasimati, Espejo-Garcia, Vali, Malounas and Fountas. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Plant Science
Kasimati, Aikaterini
Espejo-Garcia, Borja
Vali, Eleanna
Malounas, Ioannis
Fountas, Spyros
Investigating a Selection of Methods for the Prediction of Total Soluble Solids Among Wine Grape Quality Characteristics Using Normalized Difference Vegetation Index Data From Proximal and Remote Sensing
title Investigating a Selection of Methods for the Prediction of Total Soluble Solids Among Wine Grape Quality Characteristics Using Normalized Difference Vegetation Index Data From Proximal and Remote Sensing
title_full Investigating a Selection of Methods for the Prediction of Total Soluble Solids Among Wine Grape Quality Characteristics Using Normalized Difference Vegetation Index Data From Proximal and Remote Sensing
title_fullStr Investigating a Selection of Methods for the Prediction of Total Soluble Solids Among Wine Grape Quality Characteristics Using Normalized Difference Vegetation Index Data From Proximal and Remote Sensing
title_full_unstemmed Investigating a Selection of Methods for the Prediction of Total Soluble Solids Among Wine Grape Quality Characteristics Using Normalized Difference Vegetation Index Data From Proximal and Remote Sensing
title_short Investigating a Selection of Methods for the Prediction of Total Soluble Solids Among Wine Grape Quality Characteristics Using Normalized Difference Vegetation Index Data From Proximal and Remote Sensing
title_sort investigating a selection of methods for the prediction of total soluble solids among wine grape quality characteristics using normalized difference vegetation index data from proximal and remote sensing
topic Plant Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8226266/
https://www.ncbi.nlm.nih.gov/pubmed/34178002
http://dx.doi.org/10.3389/fpls.2021.683078
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