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Characteristics of the Soil Microbial Communities in Different Slope Positions along an Inverted Stone Slope in a Degraded Karst Tiankeng
SIMPLE SUMMARY: Karst tiankeng is a special and magnificent surface negative terrain with unique scientific value. The underground forests developed on inverted stone slopes in tiankeng are important areas for biodiversity conservation. This research used Illumina high-throughput sequencing technolo...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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MDPI
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8227116/ https://www.ncbi.nlm.nih.gov/pubmed/34072056 http://dx.doi.org/10.3390/biology10060474 |
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author | Jiang, Cong Feng, Jie Zhu, Su-Feng Shui, Wei |
author_facet | Jiang, Cong Feng, Jie Zhu, Su-Feng Shui, Wei |
author_sort | Jiang, Cong |
collection | PubMed |
description | SIMPLE SUMMARY: Karst tiankeng is a special and magnificent surface negative terrain with unique scientific value. The underground forests developed on inverted stone slopes in tiankeng are important areas for biodiversity conservation. This research used Illumina high-throughput sequencing technology to determine the soil microbial communities at four sites (at the bottom of the slope (BS), in the middle of the slope (MS), in the upper part of the slope (US), and outside the tiankeng (OT)) along the inverted stone slopes. The microbial communities at different slope positions presented similar compositions but different abundances. The dominant phyla in the inverted stone slope were Proteobacteria, Actinobacteria and Acidobacteria. The microbial community diversity was greater at the US site. The microbial communities with more abundant functional genes involved in C/N cycles were located at the BS site. The distribution of the microbial community was highly correlated with the Total nitrogen and pH. Understanding the soil microbial communities on inverted stone slopes is important for monitoring the ecology of tiankeng and biodiversity value assessments. ABSTRACT: The underground forests developed on inverted stone slopes in degraded karst tiankengs are important areas for biodiversity conservation, but the microbial community profiles have not been sufficiently characterized. Thus, we investigated the soil microbial communities at four sites (at the bottom of the slope (BS), in the middle of the slope (MS), in the upper part of the slope (US) and outside the tiankeng (OT)) in the Shenxiantang tiankeng. The dominant phyla in the inverted stone slope were Proteobacteria, Actinobacteria, and Acidobacteria, and the relative abundance were different in different slope positions. The Shannon–Wiener diversity index of the microbial community was significantly greater for the US site than for the MS or BS sites. The metabolism functional pathways (including C/N cycle) were more abundant at the BS site. Total nitrogen and pH were the dominant factors in determining the distribution of the microbial community along an inverted stone slope. These results suggest that topographic heterogeneity can influence the variations in the soil microbial structure, diversity, and function in degraded karst tiankengs and emphasized the ecological value of inverted stone slopes within karst tiankengs. |
format | Online Article Text |
id | pubmed-8227116 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-82271162021-06-26 Characteristics of the Soil Microbial Communities in Different Slope Positions along an Inverted Stone Slope in a Degraded Karst Tiankeng Jiang, Cong Feng, Jie Zhu, Su-Feng Shui, Wei Biology (Basel) Article SIMPLE SUMMARY: Karst tiankeng is a special and magnificent surface negative terrain with unique scientific value. The underground forests developed on inverted stone slopes in tiankeng are important areas for biodiversity conservation. This research used Illumina high-throughput sequencing technology to determine the soil microbial communities at four sites (at the bottom of the slope (BS), in the middle of the slope (MS), in the upper part of the slope (US), and outside the tiankeng (OT)) along the inverted stone slopes. The microbial communities at different slope positions presented similar compositions but different abundances. The dominant phyla in the inverted stone slope were Proteobacteria, Actinobacteria and Acidobacteria. The microbial community diversity was greater at the US site. The microbial communities with more abundant functional genes involved in C/N cycles were located at the BS site. The distribution of the microbial community was highly correlated with the Total nitrogen and pH. Understanding the soil microbial communities on inverted stone slopes is important for monitoring the ecology of tiankeng and biodiversity value assessments. ABSTRACT: The underground forests developed on inverted stone slopes in degraded karst tiankengs are important areas for biodiversity conservation, but the microbial community profiles have not been sufficiently characterized. Thus, we investigated the soil microbial communities at four sites (at the bottom of the slope (BS), in the middle of the slope (MS), in the upper part of the slope (US) and outside the tiankeng (OT)) in the Shenxiantang tiankeng. The dominant phyla in the inverted stone slope were Proteobacteria, Actinobacteria, and Acidobacteria, and the relative abundance were different in different slope positions. The Shannon–Wiener diversity index of the microbial community was significantly greater for the US site than for the MS or BS sites. The metabolism functional pathways (including C/N cycle) were more abundant at the BS site. Total nitrogen and pH were the dominant factors in determining the distribution of the microbial community along an inverted stone slope. These results suggest that topographic heterogeneity can influence the variations in the soil microbial structure, diversity, and function in degraded karst tiankengs and emphasized the ecological value of inverted stone slopes within karst tiankengs. MDPI 2021-05-27 /pmc/articles/PMC8227116/ /pubmed/34072056 http://dx.doi.org/10.3390/biology10060474 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Jiang, Cong Feng, Jie Zhu, Su-Feng Shui, Wei Characteristics of the Soil Microbial Communities in Different Slope Positions along an Inverted Stone Slope in a Degraded Karst Tiankeng |
title | Characteristics of the Soil Microbial Communities in Different Slope Positions along an Inverted Stone Slope in a Degraded Karst Tiankeng |
title_full | Characteristics of the Soil Microbial Communities in Different Slope Positions along an Inverted Stone Slope in a Degraded Karst Tiankeng |
title_fullStr | Characteristics of the Soil Microbial Communities in Different Slope Positions along an Inverted Stone Slope in a Degraded Karst Tiankeng |
title_full_unstemmed | Characteristics of the Soil Microbial Communities in Different Slope Positions along an Inverted Stone Slope in a Degraded Karst Tiankeng |
title_short | Characteristics of the Soil Microbial Communities in Different Slope Positions along an Inverted Stone Slope in a Degraded Karst Tiankeng |
title_sort | characteristics of the soil microbial communities in different slope positions along an inverted stone slope in a degraded karst tiankeng |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8227116/ https://www.ncbi.nlm.nih.gov/pubmed/34072056 http://dx.doi.org/10.3390/biology10060474 |
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