Cargando…

Accurate classification of secondary progression in multiple sclerosis using a decision tree

BACKGROUND: The absence of reliable imaging or biological markers of phenotype transition in multiple sclerosis (MS) makes assignment of current phenotype status difficult. OBJECTIVE: The authors sought to determine whether clinical information can be used to accurately assign current disease phenot...

Descripción completa

Detalles Bibliográficos
Autores principales: Ramanujam, Ryan, Zhu, Feng, Fink, Katharina, Karrenbauer, Virginija Danylaitė, Lorscheider, Johannes, Benkert, Pascal, Kingwell, Elaine, Tremlett, Helen, Hillert, Jan, Manouchehrinia, Ali
Formato: Online Artículo Texto
Lenguaje:English
Publicado: SAGE Publications 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8227440/
https://www.ncbi.nlm.nih.gov/pubmed/33263261
http://dx.doi.org/10.1177/1352458520975323
_version_ 1783712524469796864
author Ramanujam, Ryan
Zhu, Feng
Fink, Katharina
Karrenbauer, Virginija Danylaitė
Lorscheider, Johannes
Benkert, Pascal
Kingwell, Elaine
Tremlett, Helen
Hillert, Jan
Manouchehrinia, Ali
author_facet Ramanujam, Ryan
Zhu, Feng
Fink, Katharina
Karrenbauer, Virginija Danylaitė
Lorscheider, Johannes
Benkert, Pascal
Kingwell, Elaine
Tremlett, Helen
Hillert, Jan
Manouchehrinia, Ali
author_sort Ramanujam, Ryan
collection PubMed
description BACKGROUND: The absence of reliable imaging or biological markers of phenotype transition in multiple sclerosis (MS) makes assignment of current phenotype status difficult. OBJECTIVE: The authors sought to determine whether clinical information can be used to accurately assign current disease phenotypes. METHODS: Data from the clinical visits of 14,387 MS patients in Sweden were collected. Classifying algorithms based on several demographic and clinical factors were examined. Results obtained from the best classifier when predicting neurologist recorded disease classification were replicated in an independent cohort from British Columbia and were compared to a previously published algorithm and clinical judgment of three neurologists. RESULTS: A decision tree (the classifier) containing only most recently available expanded disability scale status score and age obtained 89.3% (95% confidence intervals (CIs): 88.8–89.8) classification accuracy, defined as concordance with the latest reported status. Validation in the independent cohort resulted in 82.0% (95% CI: 81.0–83.1) accuracy. A previously published classification algorithm with slight modifications achieved 77.8% (95% CI: 77.1–78.4) accuracy. With complete patient history of 100 patients, three neurologists obtained 84.3% accuracy compared with 85% for the classifier using the same data. CONCLUSION: The classifier can be used to standardize definitions of disease phenotype across different cohorts. Clinically, this model could assist neurologists by providing additional information.
format Online
Article
Text
id pubmed-8227440
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher SAGE Publications
record_format MEDLINE/PubMed
spelling pubmed-82274402021-07-01 Accurate classification of secondary progression in multiple sclerosis using a decision tree Ramanujam, Ryan Zhu, Feng Fink, Katharina Karrenbauer, Virginija Danylaitė Lorscheider, Johannes Benkert, Pascal Kingwell, Elaine Tremlett, Helen Hillert, Jan Manouchehrinia, Ali Mult Scler Original Research Papers BACKGROUND: The absence of reliable imaging or biological markers of phenotype transition in multiple sclerosis (MS) makes assignment of current phenotype status difficult. OBJECTIVE: The authors sought to determine whether clinical information can be used to accurately assign current disease phenotypes. METHODS: Data from the clinical visits of 14,387 MS patients in Sweden were collected. Classifying algorithms based on several demographic and clinical factors were examined. Results obtained from the best classifier when predicting neurologist recorded disease classification were replicated in an independent cohort from British Columbia and were compared to a previously published algorithm and clinical judgment of three neurologists. RESULTS: A decision tree (the classifier) containing only most recently available expanded disability scale status score and age obtained 89.3% (95% confidence intervals (CIs): 88.8–89.8) classification accuracy, defined as concordance with the latest reported status. Validation in the independent cohort resulted in 82.0% (95% CI: 81.0–83.1) accuracy. A previously published classification algorithm with slight modifications achieved 77.8% (95% CI: 77.1–78.4) accuracy. With complete patient history of 100 patients, three neurologists obtained 84.3% accuracy compared with 85% for the classifier using the same data. CONCLUSION: The classifier can be used to standardize definitions of disease phenotype across different cohorts. Clinically, this model could assist neurologists by providing additional information. SAGE Publications 2020-12-02 2021-07 /pmc/articles/PMC8227440/ /pubmed/33263261 http://dx.doi.org/10.1177/1352458520975323 Text en © The Author(s), 2020 https://creativecommons.org/licenses/by/4.0/This article is distributed under the terms of the Creative Commons Attribution 4.0 License (https://creativecommons.org/licenses/by/4.0/) which permits any use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access pages (https://us.sagepub.com/en-us/nam/open-access-at-sage).
spellingShingle Original Research Papers
Ramanujam, Ryan
Zhu, Feng
Fink, Katharina
Karrenbauer, Virginija Danylaitė
Lorscheider, Johannes
Benkert, Pascal
Kingwell, Elaine
Tremlett, Helen
Hillert, Jan
Manouchehrinia, Ali
Accurate classification of secondary progression in multiple sclerosis using a decision tree
title Accurate classification of secondary progression in multiple sclerosis using a decision tree
title_full Accurate classification of secondary progression in multiple sclerosis using a decision tree
title_fullStr Accurate classification of secondary progression in multiple sclerosis using a decision tree
title_full_unstemmed Accurate classification of secondary progression in multiple sclerosis using a decision tree
title_short Accurate classification of secondary progression in multiple sclerosis using a decision tree
title_sort accurate classification of secondary progression in multiple sclerosis using a decision tree
topic Original Research Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8227440/
https://www.ncbi.nlm.nih.gov/pubmed/33263261
http://dx.doi.org/10.1177/1352458520975323
work_keys_str_mv AT ramanujamryan accurateclassificationofsecondaryprogressioninmultiplesclerosisusingadecisiontree
AT zhufeng accurateclassificationofsecondaryprogressioninmultiplesclerosisusingadecisiontree
AT finkkatharina accurateclassificationofsecondaryprogressioninmultiplesclerosisusingadecisiontree
AT karrenbauervirginijadanylaite accurateclassificationofsecondaryprogressioninmultiplesclerosisusingadecisiontree
AT lorscheiderjohannes accurateclassificationofsecondaryprogressioninmultiplesclerosisusingadecisiontree
AT benkertpascal accurateclassificationofsecondaryprogressioninmultiplesclerosisusingadecisiontree
AT kingwellelaine accurateclassificationofsecondaryprogressioninmultiplesclerosisusingadecisiontree
AT tremletthelen accurateclassificationofsecondaryprogressioninmultiplesclerosisusingadecisiontree
AT hillertjan accurateclassificationofsecondaryprogressioninmultiplesclerosisusingadecisiontree
AT manouchehriniaali accurateclassificationofsecondaryprogressioninmultiplesclerosisusingadecisiontree
AT accurateclassificationofsecondaryprogressioninmultiplesclerosisusingadecisiontree