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Accurate classification of secondary progression in multiple sclerosis using a decision tree
BACKGROUND: The absence of reliable imaging or biological markers of phenotype transition in multiple sclerosis (MS) makes assignment of current phenotype status difficult. OBJECTIVE: The authors sought to determine whether clinical information can be used to accurately assign current disease phenot...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
SAGE Publications
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8227440/ https://www.ncbi.nlm.nih.gov/pubmed/33263261 http://dx.doi.org/10.1177/1352458520975323 |
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author | Ramanujam, Ryan Zhu, Feng Fink, Katharina Karrenbauer, Virginija Danylaitė Lorscheider, Johannes Benkert, Pascal Kingwell, Elaine Tremlett, Helen Hillert, Jan Manouchehrinia, Ali |
author_facet | Ramanujam, Ryan Zhu, Feng Fink, Katharina Karrenbauer, Virginija Danylaitė Lorscheider, Johannes Benkert, Pascal Kingwell, Elaine Tremlett, Helen Hillert, Jan Manouchehrinia, Ali |
author_sort | Ramanujam, Ryan |
collection | PubMed |
description | BACKGROUND: The absence of reliable imaging or biological markers of phenotype transition in multiple sclerosis (MS) makes assignment of current phenotype status difficult. OBJECTIVE: The authors sought to determine whether clinical information can be used to accurately assign current disease phenotypes. METHODS: Data from the clinical visits of 14,387 MS patients in Sweden were collected. Classifying algorithms based on several demographic and clinical factors were examined. Results obtained from the best classifier when predicting neurologist recorded disease classification were replicated in an independent cohort from British Columbia and were compared to a previously published algorithm and clinical judgment of three neurologists. RESULTS: A decision tree (the classifier) containing only most recently available expanded disability scale status score and age obtained 89.3% (95% confidence intervals (CIs): 88.8–89.8) classification accuracy, defined as concordance with the latest reported status. Validation in the independent cohort resulted in 82.0% (95% CI: 81.0–83.1) accuracy. A previously published classification algorithm with slight modifications achieved 77.8% (95% CI: 77.1–78.4) accuracy. With complete patient history of 100 patients, three neurologists obtained 84.3% accuracy compared with 85% for the classifier using the same data. CONCLUSION: The classifier can be used to standardize definitions of disease phenotype across different cohorts. Clinically, this model could assist neurologists by providing additional information. |
format | Online Article Text |
id | pubmed-8227440 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | SAGE Publications |
record_format | MEDLINE/PubMed |
spelling | pubmed-82274402021-07-01 Accurate classification of secondary progression in multiple sclerosis using a decision tree Ramanujam, Ryan Zhu, Feng Fink, Katharina Karrenbauer, Virginija Danylaitė Lorscheider, Johannes Benkert, Pascal Kingwell, Elaine Tremlett, Helen Hillert, Jan Manouchehrinia, Ali Mult Scler Original Research Papers BACKGROUND: The absence of reliable imaging or biological markers of phenotype transition in multiple sclerosis (MS) makes assignment of current phenotype status difficult. OBJECTIVE: The authors sought to determine whether clinical information can be used to accurately assign current disease phenotypes. METHODS: Data from the clinical visits of 14,387 MS patients in Sweden were collected. Classifying algorithms based on several demographic and clinical factors were examined. Results obtained from the best classifier when predicting neurologist recorded disease classification were replicated in an independent cohort from British Columbia and were compared to a previously published algorithm and clinical judgment of three neurologists. RESULTS: A decision tree (the classifier) containing only most recently available expanded disability scale status score and age obtained 89.3% (95% confidence intervals (CIs): 88.8–89.8) classification accuracy, defined as concordance with the latest reported status. Validation in the independent cohort resulted in 82.0% (95% CI: 81.0–83.1) accuracy. A previously published classification algorithm with slight modifications achieved 77.8% (95% CI: 77.1–78.4) accuracy. With complete patient history of 100 patients, three neurologists obtained 84.3% accuracy compared with 85% for the classifier using the same data. CONCLUSION: The classifier can be used to standardize definitions of disease phenotype across different cohorts. Clinically, this model could assist neurologists by providing additional information. SAGE Publications 2020-12-02 2021-07 /pmc/articles/PMC8227440/ /pubmed/33263261 http://dx.doi.org/10.1177/1352458520975323 Text en © The Author(s), 2020 https://creativecommons.org/licenses/by/4.0/This article is distributed under the terms of the Creative Commons Attribution 4.0 License (https://creativecommons.org/licenses/by/4.0/) which permits any use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access pages (https://us.sagepub.com/en-us/nam/open-access-at-sage). |
spellingShingle | Original Research Papers Ramanujam, Ryan Zhu, Feng Fink, Katharina Karrenbauer, Virginija Danylaitė Lorscheider, Johannes Benkert, Pascal Kingwell, Elaine Tremlett, Helen Hillert, Jan Manouchehrinia, Ali Accurate classification of secondary progression in multiple sclerosis using a decision tree |
title | Accurate classification of secondary progression in multiple
sclerosis using a decision tree |
title_full | Accurate classification of secondary progression in multiple
sclerosis using a decision tree |
title_fullStr | Accurate classification of secondary progression in multiple
sclerosis using a decision tree |
title_full_unstemmed | Accurate classification of secondary progression in multiple
sclerosis using a decision tree |
title_short | Accurate classification of secondary progression in multiple
sclerosis using a decision tree |
title_sort | accurate classification of secondary progression in multiple
sclerosis using a decision tree |
topic | Original Research Papers |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8227440/ https://www.ncbi.nlm.nih.gov/pubmed/33263261 http://dx.doi.org/10.1177/1352458520975323 |
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