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A Prediction Method for Animal-Derived Drug Resistance Trend Using a Grey-BP Neural Network Combination Model

There is an increasing drug resistance of animal-derived pathogens, seriously posing a huge threat to the health of animals and humans. Traditional drug resistance testing methods are expensive, have low efficiency, and are time-consuming, making it difficult to evaluate overall drug resistance. To...

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Detalles Bibliográficos
Autores principales: Li, Xinxing, Zhang, Ziyi, Xu, Ding, Wu, Congming, Li, Jianping, Zheng, Yongjun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8228373/
https://www.ncbi.nlm.nih.gov/pubmed/34207795
http://dx.doi.org/10.3390/antibiotics10060692
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author Li, Xinxing
Zhang, Ziyi
Xu, Ding
Wu, Congming
Li, Jianping
Zheng, Yongjun
author_facet Li, Xinxing
Zhang, Ziyi
Xu, Ding
Wu, Congming
Li, Jianping
Zheng, Yongjun
author_sort Li, Xinxing
collection PubMed
description There is an increasing drug resistance of animal-derived pathogens, seriously posing a huge threat to the health of animals and humans. Traditional drug resistance testing methods are expensive, have low efficiency, and are time-consuming, making it difficult to evaluate overall drug resistance. To develop a better approach to detect drug resistance, a small sample of Escherichia coli resistance data from 2003 to 2014 in Chengdu, Sichuan Province was used, and multiple regression interpolation was applied to impute missing data based on the time series. Next, cluster analysis was used to classify anti-E. coli drugs. According to the classification results, a GM(1,1)-BP model was selected to analyze the changes in the drug resistance of E. coli, and a drug resistance prediction system was constructed based on the GM(1,1)-BP Neural Network model. The GM(1,1)-BP Neural Network model showed a good prediction effect using a small sample of drug resistance data, with a determination coefficient R(2) of 0.7830 and an RMSE of only 0.0527. This model can be applied for the prediction of drug resistance trends of other animal-derived pathogenic bacteria, and provides the scientific and technical means for the effective assessment of bacterial resistance.
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spelling pubmed-82283732021-06-26 A Prediction Method for Animal-Derived Drug Resistance Trend Using a Grey-BP Neural Network Combination Model Li, Xinxing Zhang, Ziyi Xu, Ding Wu, Congming Li, Jianping Zheng, Yongjun Antibiotics (Basel) Article There is an increasing drug resistance of animal-derived pathogens, seriously posing a huge threat to the health of animals and humans. Traditional drug resistance testing methods are expensive, have low efficiency, and are time-consuming, making it difficult to evaluate overall drug resistance. To develop a better approach to detect drug resistance, a small sample of Escherichia coli resistance data from 2003 to 2014 in Chengdu, Sichuan Province was used, and multiple regression interpolation was applied to impute missing data based on the time series. Next, cluster analysis was used to classify anti-E. coli drugs. According to the classification results, a GM(1,1)-BP model was selected to analyze the changes in the drug resistance of E. coli, and a drug resistance prediction system was constructed based on the GM(1,1)-BP Neural Network model. The GM(1,1)-BP Neural Network model showed a good prediction effect using a small sample of drug resistance data, with a determination coefficient R(2) of 0.7830 and an RMSE of only 0.0527. This model can be applied for the prediction of drug resistance trends of other animal-derived pathogenic bacteria, and provides the scientific and technical means for the effective assessment of bacterial resistance. MDPI 2021-06-09 /pmc/articles/PMC8228373/ /pubmed/34207795 http://dx.doi.org/10.3390/antibiotics10060692 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Li, Xinxing
Zhang, Ziyi
Xu, Ding
Wu, Congming
Li, Jianping
Zheng, Yongjun
A Prediction Method for Animal-Derived Drug Resistance Trend Using a Grey-BP Neural Network Combination Model
title A Prediction Method for Animal-Derived Drug Resistance Trend Using a Grey-BP Neural Network Combination Model
title_full A Prediction Method for Animal-Derived Drug Resistance Trend Using a Grey-BP Neural Network Combination Model
title_fullStr A Prediction Method for Animal-Derived Drug Resistance Trend Using a Grey-BP Neural Network Combination Model
title_full_unstemmed A Prediction Method for Animal-Derived Drug Resistance Trend Using a Grey-BP Neural Network Combination Model
title_short A Prediction Method for Animal-Derived Drug Resistance Trend Using a Grey-BP Neural Network Combination Model
title_sort prediction method for animal-derived drug resistance trend using a grey-bp neural network combination model
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8228373/
https://www.ncbi.nlm.nih.gov/pubmed/34207795
http://dx.doi.org/10.3390/antibiotics10060692
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