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Pitfalls in Tick and Tick-Borne Pathogens Research, Some Recommendations and a Call for Data Sharing

An understanding of the relationships of ticks and tick-borne pathogens can only be achieved by integrating data from multiple studies. The publication of raw material is a necessary step for wide-area meta-analyses and study design, data collection and reporting require harmonization. This is an op...

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Autores principales: Estrada-Peña, Agustín, Cevidanes, Aitor, Sprong, Hein, Millán, Javier
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8229135/
https://www.ncbi.nlm.nih.gov/pubmed/34200175
http://dx.doi.org/10.3390/pathogens10060712
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author Estrada-Peña, Agustín
Cevidanes, Aitor
Sprong, Hein
Millán, Javier
author_facet Estrada-Peña, Agustín
Cevidanes, Aitor
Sprong, Hein
Millán, Javier
author_sort Estrada-Peña, Agustín
collection PubMed
description An understanding of the relationships of ticks and tick-borne pathogens can only be achieved by integrating data from multiple studies. The publication of raw material is a necessary step for wide-area meta-analyses and study design, data collection and reporting require harmonization. This is an opinion paper, not a consensus position, and is open to debate. This work reflects our view about how data should be communicated in mainstream journals. We indicate rules that should be observed in recording weather data, to avoid serendipitous correlations between the density of ticks and climate variables and recommend the inclusion of raw data in reports. We stress the need for standardized methods to collect ticks that cannot be obtained by standard flagging. The reporting of infection rates of pathogens in ticks should avoid conclusions based on pure molecular findings in feeding ticks. Studies demonstrating the vectorial capacity of ticks should not be supported only by molecular surveys of feeding ticks. Vacuous conclusions about vectorial or reservoir status based solely on the finding of genomic material of a pathogen should be discouraged. We stress that phylogenetic studies based on random selection of sequences from GenBank are unsuitable. We firmly support the development of a dedicated server of curated sequences of ticks and pathogens as a standard for future studies.
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spelling pubmed-82291352021-06-26 Pitfalls in Tick and Tick-Borne Pathogens Research, Some Recommendations and a Call for Data Sharing Estrada-Peña, Agustín Cevidanes, Aitor Sprong, Hein Millán, Javier Pathogens Opinion An understanding of the relationships of ticks and tick-borne pathogens can only be achieved by integrating data from multiple studies. The publication of raw material is a necessary step for wide-area meta-analyses and study design, data collection and reporting require harmonization. This is an opinion paper, not a consensus position, and is open to debate. This work reflects our view about how data should be communicated in mainstream journals. We indicate rules that should be observed in recording weather data, to avoid serendipitous correlations between the density of ticks and climate variables and recommend the inclusion of raw data in reports. We stress the need for standardized methods to collect ticks that cannot be obtained by standard flagging. The reporting of infection rates of pathogens in ticks should avoid conclusions based on pure molecular findings in feeding ticks. Studies demonstrating the vectorial capacity of ticks should not be supported only by molecular surveys of feeding ticks. Vacuous conclusions about vectorial or reservoir status based solely on the finding of genomic material of a pathogen should be discouraged. We stress that phylogenetic studies based on random selection of sequences from GenBank are unsuitable. We firmly support the development of a dedicated server of curated sequences of ticks and pathogens as a standard for future studies. MDPI 2021-06-07 /pmc/articles/PMC8229135/ /pubmed/34200175 http://dx.doi.org/10.3390/pathogens10060712 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Opinion
Estrada-Peña, Agustín
Cevidanes, Aitor
Sprong, Hein
Millán, Javier
Pitfalls in Tick and Tick-Borne Pathogens Research, Some Recommendations and a Call for Data Sharing
title Pitfalls in Tick and Tick-Borne Pathogens Research, Some Recommendations and a Call for Data Sharing
title_full Pitfalls in Tick and Tick-Borne Pathogens Research, Some Recommendations and a Call for Data Sharing
title_fullStr Pitfalls in Tick and Tick-Borne Pathogens Research, Some Recommendations and a Call for Data Sharing
title_full_unstemmed Pitfalls in Tick and Tick-Borne Pathogens Research, Some Recommendations and a Call for Data Sharing
title_short Pitfalls in Tick and Tick-Borne Pathogens Research, Some Recommendations and a Call for Data Sharing
title_sort pitfalls in tick and tick-borne pathogens research, some recommendations and a call for data sharing
topic Opinion
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8229135/
https://www.ncbi.nlm.nih.gov/pubmed/34200175
http://dx.doi.org/10.3390/pathogens10060712
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