Cargando…

Rice (Oryza sativa) TIR1 and 5′adamantyl-IAA Significantly Improve the Auxin-Inducible Degron System in Schizosaccharomyces pombe

The auxin-inducible degron (AID) system is a powerful tool to induce targeted degradation of proteins in eukaryotic model organisms. The efficiency of the existing Schizosaccharomyces pombe AID system is limited due to the fusion of the F-box protein TIR1 protein to the SCF component, Skp1 (Skp1-TIR...

Descripción completa

Detalles Bibliográficos
Autores principales: Watson, Adam T., Hassell-Hart, Storm, Spencer, John, Carr, Antony M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8229956/
https://www.ncbi.nlm.nih.gov/pubmed/34201031
http://dx.doi.org/10.3390/genes12060882
_version_ 1783713093471174656
author Watson, Adam T.
Hassell-Hart, Storm
Spencer, John
Carr, Antony M.
author_facet Watson, Adam T.
Hassell-Hart, Storm
Spencer, John
Carr, Antony M.
author_sort Watson, Adam T.
collection PubMed
description The auxin-inducible degron (AID) system is a powerful tool to induce targeted degradation of proteins in eukaryotic model organisms. The efficiency of the existing Schizosaccharomyces pombe AID system is limited due to the fusion of the F-box protein TIR1 protein to the SCF component, Skp1 (Skp1-TIR1). Here, we report an improved AID system for S. pombe that uses the TIR1 from Oryza sativa (OsTIR1) not fused to Skp1. Furthermore, we demonstrate that degradation efficiency can be improved by pairing an OsTIR1 auxin-binding site mutant, OsTIR1(F74A), with an auxin analogue, 5′adamantyl-IAA (AID2). We provide evidence for the enhanced functionality of the OsTIR1 AID and AID2 systems by application to the essential DNA replication factor Mcm4 and to a non-essential recombination protein, Rad52. Unlike AID, no detectable auxin-independent depletion of AID-tagged proteins was observed using AID2.
format Online
Article
Text
id pubmed-8229956
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-82299562021-06-26 Rice (Oryza sativa) TIR1 and 5′adamantyl-IAA Significantly Improve the Auxin-Inducible Degron System in Schizosaccharomyces pombe Watson, Adam T. Hassell-Hart, Storm Spencer, John Carr, Antony M. Genes (Basel) Article The auxin-inducible degron (AID) system is a powerful tool to induce targeted degradation of proteins in eukaryotic model organisms. The efficiency of the existing Schizosaccharomyces pombe AID system is limited due to the fusion of the F-box protein TIR1 protein to the SCF component, Skp1 (Skp1-TIR1). Here, we report an improved AID system for S. pombe that uses the TIR1 from Oryza sativa (OsTIR1) not fused to Skp1. Furthermore, we demonstrate that degradation efficiency can be improved by pairing an OsTIR1 auxin-binding site mutant, OsTIR1(F74A), with an auxin analogue, 5′adamantyl-IAA (AID2). We provide evidence for the enhanced functionality of the OsTIR1 AID and AID2 systems by application to the essential DNA replication factor Mcm4 and to a non-essential recombination protein, Rad52. Unlike AID, no detectable auxin-independent depletion of AID-tagged proteins was observed using AID2. MDPI 2021-06-08 /pmc/articles/PMC8229956/ /pubmed/34201031 http://dx.doi.org/10.3390/genes12060882 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Watson, Adam T.
Hassell-Hart, Storm
Spencer, John
Carr, Antony M.
Rice (Oryza sativa) TIR1 and 5′adamantyl-IAA Significantly Improve the Auxin-Inducible Degron System in Schizosaccharomyces pombe
title Rice (Oryza sativa) TIR1 and 5′adamantyl-IAA Significantly Improve the Auxin-Inducible Degron System in Schizosaccharomyces pombe
title_full Rice (Oryza sativa) TIR1 and 5′adamantyl-IAA Significantly Improve the Auxin-Inducible Degron System in Schizosaccharomyces pombe
title_fullStr Rice (Oryza sativa) TIR1 and 5′adamantyl-IAA Significantly Improve the Auxin-Inducible Degron System in Schizosaccharomyces pombe
title_full_unstemmed Rice (Oryza sativa) TIR1 and 5′adamantyl-IAA Significantly Improve the Auxin-Inducible Degron System in Schizosaccharomyces pombe
title_short Rice (Oryza sativa) TIR1 and 5′adamantyl-IAA Significantly Improve the Auxin-Inducible Degron System in Schizosaccharomyces pombe
title_sort rice (oryza sativa) tir1 and 5′adamantyl-iaa significantly improve the auxin-inducible degron system in schizosaccharomyces pombe
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8229956/
https://www.ncbi.nlm.nih.gov/pubmed/34201031
http://dx.doi.org/10.3390/genes12060882
work_keys_str_mv AT watsonadamt riceoryzasativatir1and5adamantyliaasignificantlyimprovetheauxininducibledegronsysteminschizosaccharomycespombe
AT hassellhartstorm riceoryzasativatir1and5adamantyliaasignificantlyimprovetheauxininducibledegronsysteminschizosaccharomycespombe
AT spencerjohn riceoryzasativatir1and5adamantyliaasignificantlyimprovetheauxininducibledegronsysteminschizosaccharomycespombe
AT carrantonym riceoryzasativatir1and5adamantyliaasignificantlyimprovetheauxininducibledegronsysteminschizosaccharomycespombe