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GoRG: Towards a GPU-Accelerated Multiview Hyperspectral Depth Estimation Tool for Medical Applications

HyperSpectral (HS) images have been successfully used for brain tumor boundary detection during resection operations. Nowadays, these classification maps coexist with other technologies such as MRI or IOUS that improve a neurosurgeon’s action, with their incorporation being a neurosurgeon’s task. Th...

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Autores principales: Sancho, Jaime, Sutradhar, Pallab, Rosa, Gonzalo, Chavarrías, Miguel, Perez-Nuñez, Angel, Salvador, Rubén, Lagares, Alfonso, Juárez, Eduardo, Sanz, César
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8231943/
https://www.ncbi.nlm.nih.gov/pubmed/34198595
http://dx.doi.org/10.3390/s21124091
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author Sancho, Jaime
Sutradhar, Pallab
Rosa, Gonzalo
Chavarrías, Miguel
Perez-Nuñez, Angel
Salvador, Rubén
Lagares, Alfonso
Juárez, Eduardo
Sanz, César
author_facet Sancho, Jaime
Sutradhar, Pallab
Rosa, Gonzalo
Chavarrías, Miguel
Perez-Nuñez, Angel
Salvador, Rubén
Lagares, Alfonso
Juárez, Eduardo
Sanz, César
author_sort Sancho, Jaime
collection PubMed
description HyperSpectral (HS) images have been successfully used for brain tumor boundary detection during resection operations. Nowadays, these classification maps coexist with other technologies such as MRI or IOUS that improve a neurosurgeon’s action, with their incorporation being a neurosurgeon’s task. The project in which this work is framed generates an unified and more accurate 3D immersive model using HS, MRI, and IOUS information. To do so, the HS images need to include 3D information and it needs to be generated in real-time operating room conditions, around a few seconds. This work presents Graph cuts Reference depth estimation in GPU (GoRG), a GPU-accelerated multiview depth estimation tool for HS images also able to process YUV images in less than 5.5 s on average. Compared to a high-quality SoA algorithm, MPEG DERS, GoRG YUV obtain quality losses of −0.93 dB, −0.6 dB, and −1.96% for WS-PSNR, IV-PSNR, and VMAF, respectively, using a video synthesis processing chain. For HS test images, GoRG obtains an average RMSE of 7.5 cm, with most of its errors in the background, needing around 850 ms to process one frame and view. These results demonstrate the feasibility of using GoRG during a tumor resection operation.
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spelling pubmed-82319432021-06-26 GoRG: Towards a GPU-Accelerated Multiview Hyperspectral Depth Estimation Tool for Medical Applications Sancho, Jaime Sutradhar, Pallab Rosa, Gonzalo Chavarrías, Miguel Perez-Nuñez, Angel Salvador, Rubén Lagares, Alfonso Juárez, Eduardo Sanz, César Sensors (Basel) Article HyperSpectral (HS) images have been successfully used for brain tumor boundary detection during resection operations. Nowadays, these classification maps coexist with other technologies such as MRI or IOUS that improve a neurosurgeon’s action, with their incorporation being a neurosurgeon’s task. The project in which this work is framed generates an unified and more accurate 3D immersive model using HS, MRI, and IOUS information. To do so, the HS images need to include 3D information and it needs to be generated in real-time operating room conditions, around a few seconds. This work presents Graph cuts Reference depth estimation in GPU (GoRG), a GPU-accelerated multiview depth estimation tool for HS images also able to process YUV images in less than 5.5 s on average. Compared to a high-quality SoA algorithm, MPEG DERS, GoRG YUV obtain quality losses of −0.93 dB, −0.6 dB, and −1.96% for WS-PSNR, IV-PSNR, and VMAF, respectively, using a video synthesis processing chain. For HS test images, GoRG obtains an average RMSE of 7.5 cm, with most of its errors in the background, needing around 850 ms to process one frame and view. These results demonstrate the feasibility of using GoRG during a tumor resection operation. MDPI 2021-06-14 /pmc/articles/PMC8231943/ /pubmed/34198595 http://dx.doi.org/10.3390/s21124091 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Sancho, Jaime
Sutradhar, Pallab
Rosa, Gonzalo
Chavarrías, Miguel
Perez-Nuñez, Angel
Salvador, Rubén
Lagares, Alfonso
Juárez, Eduardo
Sanz, César
GoRG: Towards a GPU-Accelerated Multiview Hyperspectral Depth Estimation Tool for Medical Applications
title GoRG: Towards a GPU-Accelerated Multiview Hyperspectral Depth Estimation Tool for Medical Applications
title_full GoRG: Towards a GPU-Accelerated Multiview Hyperspectral Depth Estimation Tool for Medical Applications
title_fullStr GoRG: Towards a GPU-Accelerated Multiview Hyperspectral Depth Estimation Tool for Medical Applications
title_full_unstemmed GoRG: Towards a GPU-Accelerated Multiview Hyperspectral Depth Estimation Tool for Medical Applications
title_short GoRG: Towards a GPU-Accelerated Multiview Hyperspectral Depth Estimation Tool for Medical Applications
title_sort gorg: towards a gpu-accelerated multiview hyperspectral depth estimation tool for medical applications
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8231943/
https://www.ncbi.nlm.nih.gov/pubmed/34198595
http://dx.doi.org/10.3390/s21124091
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