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Bacterial Communities in Alkaline Saline Soils Amended with Young Maize Plants or Its (Hemi)Cellulose Fraction

We studied three soils of the former lake Texcoco with different electrolytic conductivity (1.9 dS m(−1), 17.3 dS m(−1), and 33.4 dS m(−1)) and pH (9.3, 10.4, and 10.3) amended with young maize plants and their neutral detergent fibre (NDF) fraction and aerobically incubated in the laboratory for 14...

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Autores principales: Pérez-Hernández, Valentín, Hernández-Guzmán, Mario, Luna-Guido, Marco, Navarro-Noya, Yendi E., Romero-Tepal, Elda M., Dendooven, Luc
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8232260/
https://www.ncbi.nlm.nih.gov/pubmed/34203640
http://dx.doi.org/10.3390/microorganisms9061297
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author Pérez-Hernández, Valentín
Hernández-Guzmán, Mario
Luna-Guido, Marco
Navarro-Noya, Yendi E.
Romero-Tepal, Elda M.
Dendooven, Luc
author_facet Pérez-Hernández, Valentín
Hernández-Guzmán, Mario
Luna-Guido, Marco
Navarro-Noya, Yendi E.
Romero-Tepal, Elda M.
Dendooven, Luc
author_sort Pérez-Hernández, Valentín
collection PubMed
description We studied three soils of the former lake Texcoco with different electrolytic conductivity (1.9 dS m(−1), 17.3 dS m(−1), and 33.4 dS m(−1)) and pH (9.3, 10.4, and 10.3) amended with young maize plants and their neutral detergent fibre (NDF) fraction and aerobically incubated in the laboratory for 14 days while the soil bacterial community structure was monitored by means of 454-pyrosequencing of their 16S rRNA marker gene. We identified specific bacterial groups that showed adaptability to soil salinity, i.e., Prauseria in soil amended with young maize plants and Marinobacter in soil amended with NDF. An increase in soil salinity (17.3 dS m(−1), 33.4 dS m(−1)) showed more bacterial genera enriched than soil with low salinity (1.9 dS m(−1)). Functional prediction showed that members of Alfa-, Gamma-, and Deltaproteobacteria, which are known to adapt to extreme conditions, such as salinity and low nutrient soil content, were involved in the lignocellulose degradation, e.g., Marinimicrobium and Pseudomonas as cellulose degraders, and Halomonas and Methylobacterium as lignin degraders. This research showed that the taxonomic annotation and their functional prediction both highlighted keystone bacterial groups with the ability to degrade complex C-compounds, such as lignin and (hemi)cellulose, in the extreme saline-alkaline soil of the former Lake of Texcoco.
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spelling pubmed-82322602021-06-26 Bacterial Communities in Alkaline Saline Soils Amended with Young Maize Plants or Its (Hemi)Cellulose Fraction Pérez-Hernández, Valentín Hernández-Guzmán, Mario Luna-Guido, Marco Navarro-Noya, Yendi E. Romero-Tepal, Elda M. Dendooven, Luc Microorganisms Article We studied three soils of the former lake Texcoco with different electrolytic conductivity (1.9 dS m(−1), 17.3 dS m(−1), and 33.4 dS m(−1)) and pH (9.3, 10.4, and 10.3) amended with young maize plants and their neutral detergent fibre (NDF) fraction and aerobically incubated in the laboratory for 14 days while the soil bacterial community structure was monitored by means of 454-pyrosequencing of their 16S rRNA marker gene. We identified specific bacterial groups that showed adaptability to soil salinity, i.e., Prauseria in soil amended with young maize plants and Marinobacter in soil amended with NDF. An increase in soil salinity (17.3 dS m(−1), 33.4 dS m(−1)) showed more bacterial genera enriched than soil with low salinity (1.9 dS m(−1)). Functional prediction showed that members of Alfa-, Gamma-, and Deltaproteobacteria, which are known to adapt to extreme conditions, such as salinity and low nutrient soil content, were involved in the lignocellulose degradation, e.g., Marinimicrobium and Pseudomonas as cellulose degraders, and Halomonas and Methylobacterium as lignin degraders. This research showed that the taxonomic annotation and their functional prediction both highlighted keystone bacterial groups with the ability to degrade complex C-compounds, such as lignin and (hemi)cellulose, in the extreme saline-alkaline soil of the former Lake of Texcoco. MDPI 2021-06-15 /pmc/articles/PMC8232260/ /pubmed/34203640 http://dx.doi.org/10.3390/microorganisms9061297 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Pérez-Hernández, Valentín
Hernández-Guzmán, Mario
Luna-Guido, Marco
Navarro-Noya, Yendi E.
Romero-Tepal, Elda M.
Dendooven, Luc
Bacterial Communities in Alkaline Saline Soils Amended with Young Maize Plants or Its (Hemi)Cellulose Fraction
title Bacterial Communities in Alkaline Saline Soils Amended with Young Maize Plants or Its (Hemi)Cellulose Fraction
title_full Bacterial Communities in Alkaline Saline Soils Amended with Young Maize Plants or Its (Hemi)Cellulose Fraction
title_fullStr Bacterial Communities in Alkaline Saline Soils Amended with Young Maize Plants or Its (Hemi)Cellulose Fraction
title_full_unstemmed Bacterial Communities in Alkaline Saline Soils Amended with Young Maize Plants or Its (Hemi)Cellulose Fraction
title_short Bacterial Communities in Alkaline Saline Soils Amended with Young Maize Plants or Its (Hemi)Cellulose Fraction
title_sort bacterial communities in alkaline saline soils amended with young maize plants or its (hemi)cellulose fraction
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8232260/
https://www.ncbi.nlm.nih.gov/pubmed/34203640
http://dx.doi.org/10.3390/microorganisms9061297
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