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Time series forecasting of new cases and new deaths rate for COVID-19 using deep learning methods

The first known case of Coronavirus disease 2019 (COVID-19) was identified in December 2019. It has spread worldwide, leading to an ongoing pandemic, imposed restrictions and costs to many countries. Predicting the number of new cases and deaths during this period can be a useful step in predicting...

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Autores principales: Ayoobi, Nooshin, Sharifrazi, Danial, Alizadehsani, Roohallah, Shoeibi, Afshin, Gorriz, Juan M., Moosaei, Hossein, Khosravi, Abbas, Nahavandi, Saeid, Gholamzadeh Chofreh, Abdoulmohammad, Goni, Feybi Ariani, Klemeš, Jiří Jaromír, Mosavi, Amir
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Authors. Published by Elsevier B.V. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8233414/
https://www.ncbi.nlm.nih.gov/pubmed/34221854
http://dx.doi.org/10.1016/j.rinp.2021.104495
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author Ayoobi, Nooshin
Sharifrazi, Danial
Alizadehsani, Roohallah
Shoeibi, Afshin
Gorriz, Juan M.
Moosaei, Hossein
Khosravi, Abbas
Nahavandi, Saeid
Gholamzadeh Chofreh, Abdoulmohammad
Goni, Feybi Ariani
Klemeš, Jiří Jaromír
Mosavi, Amir
author_facet Ayoobi, Nooshin
Sharifrazi, Danial
Alizadehsani, Roohallah
Shoeibi, Afshin
Gorriz, Juan M.
Moosaei, Hossein
Khosravi, Abbas
Nahavandi, Saeid
Gholamzadeh Chofreh, Abdoulmohammad
Goni, Feybi Ariani
Klemeš, Jiří Jaromír
Mosavi, Amir
author_sort Ayoobi, Nooshin
collection PubMed
description The first known case of Coronavirus disease 2019 (COVID-19) was identified in December 2019. It has spread worldwide, leading to an ongoing pandemic, imposed restrictions and costs to many countries. Predicting the number of new cases and deaths during this period can be a useful step in predicting the costs and facilities required in the future. The purpose of this study is to predict new cases and deaths rate one, three and seven-day ahead during the next 100 days. The motivation for predicting every n days (instead of just every day) is the investigation of the possibility of computational cost reduction and still achieving reasonable performance. Such a scenario may be encountered in real-time forecasting of time series. Six different deep learning methods are examined on the data adopted from the WHO website. Three methods are LSTM, Convolutional LSTM, and GRU. The bidirectional extension is then considered for each method to forecast the rate of new cases and new deaths in Australia and Iran countries. This study is novel as it carries out a comprehensive evaluation of the aforementioned three deep learning methods and their bidirectional extensions to perform prediction on COVID-19 new cases and new death rate time series. To the best of our knowledge, this is the first time that Bi-GRU and Bi-Conv-LSTM models are used for prediction on COVID-19 new cases and new deaths time series. The evaluation of the methods is presented in the form of graphs and Friedman statistical test. The results show that the bidirectional models have lower errors than other models. A several error evaluation metrics are presented to compare all models, and finally, the superiority of bidirectional methods is determined. This research could be useful for organisations working against COVID-19 and determining their long-term plans.
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spelling pubmed-82334142021-06-28 Time series forecasting of new cases and new deaths rate for COVID-19 using deep learning methods Ayoobi, Nooshin Sharifrazi, Danial Alizadehsani, Roohallah Shoeibi, Afshin Gorriz, Juan M. Moosaei, Hossein Khosravi, Abbas Nahavandi, Saeid Gholamzadeh Chofreh, Abdoulmohammad Goni, Feybi Ariani Klemeš, Jiří Jaromír Mosavi, Amir Results Phys Article The first known case of Coronavirus disease 2019 (COVID-19) was identified in December 2019. It has spread worldwide, leading to an ongoing pandemic, imposed restrictions and costs to many countries. Predicting the number of new cases and deaths during this period can be a useful step in predicting the costs and facilities required in the future. The purpose of this study is to predict new cases and deaths rate one, three and seven-day ahead during the next 100 days. The motivation for predicting every n days (instead of just every day) is the investigation of the possibility of computational cost reduction and still achieving reasonable performance. Such a scenario may be encountered in real-time forecasting of time series. Six different deep learning methods are examined on the data adopted from the WHO website. Three methods are LSTM, Convolutional LSTM, and GRU. The bidirectional extension is then considered for each method to forecast the rate of new cases and new deaths in Australia and Iran countries. This study is novel as it carries out a comprehensive evaluation of the aforementioned three deep learning methods and their bidirectional extensions to perform prediction on COVID-19 new cases and new death rate time series. To the best of our knowledge, this is the first time that Bi-GRU and Bi-Conv-LSTM models are used for prediction on COVID-19 new cases and new deaths time series. The evaluation of the methods is presented in the form of graphs and Friedman statistical test. The results show that the bidirectional models have lower errors than other models. A several error evaluation metrics are presented to compare all models, and finally, the superiority of bidirectional methods is determined. This research could be useful for organisations working against COVID-19 and determining their long-term plans. The Authors. Published by Elsevier B.V. 2021-08 2021-06-26 /pmc/articles/PMC8233414/ /pubmed/34221854 http://dx.doi.org/10.1016/j.rinp.2021.104495 Text en © 2021 The Authors Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Ayoobi, Nooshin
Sharifrazi, Danial
Alizadehsani, Roohallah
Shoeibi, Afshin
Gorriz, Juan M.
Moosaei, Hossein
Khosravi, Abbas
Nahavandi, Saeid
Gholamzadeh Chofreh, Abdoulmohammad
Goni, Feybi Ariani
Klemeš, Jiří Jaromír
Mosavi, Amir
Time series forecasting of new cases and new deaths rate for COVID-19 using deep learning methods
title Time series forecasting of new cases and new deaths rate for COVID-19 using deep learning methods
title_full Time series forecasting of new cases and new deaths rate for COVID-19 using deep learning methods
title_fullStr Time series forecasting of new cases and new deaths rate for COVID-19 using deep learning methods
title_full_unstemmed Time series forecasting of new cases and new deaths rate for COVID-19 using deep learning methods
title_short Time series forecasting of new cases and new deaths rate for COVID-19 using deep learning methods
title_sort time series forecasting of new cases and new deaths rate for covid-19 using deep learning methods
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8233414/
https://www.ncbi.nlm.nih.gov/pubmed/34221854
http://dx.doi.org/10.1016/j.rinp.2021.104495
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