Cargando…

Limited Predictability of Amino Acid Substitutions in Seasonal Influenza Viruses

Seasonal influenza viruses repeatedly infect humans in part because they rapidly change their antigenic properties and evade host immune responses, necessitating frequent updates of the vaccine composition. Accurate predictions of strains circulating in the future could therefore improve the vaccine...

Descripción completa

Detalles Bibliográficos
Autores principales:	Barrat-Charlaix, Pierre, Huddleston, John, Bedford, Trevor, Neher, Richard A.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2021
Materias:	Discoveries
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8233509/ https://www.ncbi.nlm.nih.gov/pubmed/33749787 http://dx.doi.org/10.1093/molbev/msab065

Ejemplares similares

TreeKnit: Inferring ancestral reassortment graphs of influenza viruses
por: Barrat-Charlaix, Pierre, et al.
Publicado: (2022)

nextflu: real-time tracking of seasonal influenza virus evolution in humans
por: Neher, Richard A., et al.
Publicado: (2015)

Integrating genotypes and phenotypes improves long-term forecasts of seasonal influenza A/H3N2 evolution
por: Huddleston, John, et al.
Publicado: (2020)

Reassortment between Influenza B Lineages and the Emergence of a Coadapted PB1–PB2–HA Gene Complex
por: Dudas, Gytis, et al.
Publicado: (2015)

Joint visualization of seasonal influenza serology and phylogeny to inform vaccine composition
por: Lee, Jover, et al.
Publicado: (2023)

Epistatic Effects Between Amino Acid Insertions and Substitutions Mediate Toxin resistance of Vertebrate Na(+),K(+)-ATPases
por: Mohammadi, Shabnam, et al.
Publicado: (2022)

A New World Monkey Resembles Human in Bitter Taste Receptor Evolution and Function via a Single Parallel Amino Acid Substitution
por: Yang, Hui, et al.
Publicado: (2021)

Amino Acid Metabolism Conflicts with Protein Diversity
por: Krick, Teresa, et al.
Publicado: (2014)

Evolution of a Genome-Encoded Bias in Amino Acid Biosynthetic Pathways Is a Potential Indicator of Amino Acid Dynamics in the Environment
por: Fasani, Rick A., et al.
Publicado: (2014)

Evidence for the Selective Basis of Transition-to-Transversion Substitution Bias in Two RNA Viruses
por: Lyons, Daniel M, et al.
Publicado: (2017)

Evolution of Amino Acid Propensities under Stability-Mediated Epistasis
por: Youssef, Noor, et al.
Publicado: (2022)

Synonymous Genetic Variation in Natural Isolates of Escherichia coli Does Not Predict Where Synonymous Substitutions Occur in a Long-Term Experiment
por: Maddamsetti, Rohan, et al.
Publicado: (2015)

Key Role of Amino Acid Repeat Expansions in the Functional Diversification of Duplicated Transcription Factors
por: Radó-Trilla, Núria, et al.
Publicado: (2015)

Evolution of the SARS-CoV-2 Mutational Spectrum
por: Bloom, Jesse D, et al.
Publicado: (2023)

Site-Specific Amino Acid Preferences Are Mostly Conserved in Two Closely Related Protein Homologs
por: Doud, Michael B., et al.
Publicado: (2015)

The Role of Deleterious Substitutions in Crop Genomes
por: Kono, Thomas J. Y., et al.
Publicado: (2016)

Interactomics: Dozens of Viruses, Co-evolving With Humans, Including the Influenza A Virus, may Actively Distort Human Aging
por: Teulière, Jérôme, et al.
Publicado: (2023)

The Structural Determinants of Intra-Protein Compensatory Substitutions
por: Chaurasia, Shilpi, et al.
Publicado: (2022)

Exploring Protein Space: From Hydrolase to Ligase by Substitution
por: Hecht, Nir, et al.
Publicado: (2020)

Mutational Studies on Resurrected Ancestral Proteins Reveal Conservation of Site-Specific Amino Acid Preferences throughout Evolutionary History
por: Risso, Valeria A., et al.
Publicado: (2015)

Demographic History, Adaptation, and NRAP Convergent Evolution at Amino Acid Residue 100 in the World Northernmost Cattle from Siberia
por: Buggiotti, Laura, et al.
Publicado: (2021)

Limited Introgression between Rock-Wallabies with Extensive Chromosomal Rearrangements
por: Potter, Sally, et al.
Publicado: (2021)

Museomics Dissects the Genetic Basis for Adaptive Seasonal Coloration in the Least Weasel
por: Miranda, Inês, et al.
Publicado: (2021)

Substitutions at Nonconserved Rheostat Positions Modulate Function by Rewiring Long-Range, Dynamic Interactions
por: Campitelli, Paul, et al.
Publicado: (2020)

The Emergence of SARS-CoV-2 Variants of Concern Is Driven by Acceleration of the Substitution Rate
por: Tay, John H, et al.
Publicado: (2022)

Human SIRT1 Multispecificity Is Modulated by Active-Site Vicinity Substitutions during Natural Evolution
por: Hendler, Adi, et al.
Publicado: (2020)

Improving landscape inference by integrating heterogeneous data in the inverse Ising problem
por: Barrat-Charlaix, Pierre, et al.
Publicado: (2016)

Identification of Low- and High-Impact Hemagglutinin Amino Acid Substitutions That Drive Antigenic Drift of Influenza A(H1N1) Viruses
por: Harvey, William T., et al.
Publicado: (2016)

A Transcriptomic Atlas Underlying Developmental Plasticity of Seasonal Forms of Bicyclus anynana Butterflies
por: Tian, Shen, et al.
Publicado: (2022)

Bidirectional Movement of Emerging H5N8 Avian Influenza Viruses Between Europe and Asia via Migratory Birds Since Early 2020
por: Zhang, Guogang, et al.
Publicado: (2023)

Population Structure Limits Parallel Evolution in Sticklebacks
por: Fang, Bohao, et al.
Publicado: (2021)

Molecular Evolutionary Dynamics of Energy Limited Microorganisms
por: Shoemaker, William R, et al.
Publicado: (2021)

Compositional Biases among Synonymous Substitutions Cause Conflict between Gene and Protein Trees for Plastid Origins
por: Li, Blaise, et al.
Publicado: (2014)

Influence of Recombination and GC-biased Gene Conversion on the Adaptive and Nonadaptive Substitution Rate in Mammals versus Birds
por: Rousselle, Marjolaine, et al.
Publicado: (2019)

Ischemia/reperfusion injury resistance in hibernators is more than an effect of reduced body temperature or winter season
por: Bogren, Lori K, et al.
Publicado: (2014)

Limited Evidence for Selection at the FADS Locus in Native American Populations
por: Mathieson, Iain
Publicado: (2020)

Toward Inferring Potts Models for Phylogenetically Correlated Sequence Data
por: Rodriguez Horta, Edwin, et al.
Publicado: (2019)

Limitations of Phylogenomic Data Can Drive Inferred Speciation Rate Shifts
por: Craig, Jack M, et al.
Publicado: (2022)

Rubisco Adaptation Is More Limited by Phylogenetic Constraint Than by Catalytic Trade-off
por: Bouvier, Jacques W, et al.
Publicado: (2021)

Collateral Toxicity Limits the Evolution of Bacterial Release Factor 2 toward Total Omnipotence
por: Abdalaal, Hind, et al.
Publicado: (2020)

Cannot write session to /tmp/vufind_sessions/sess_lh49bo02g2fon2ihqlv2orvs53