Cargando…

Upregulation of oxidative stress gene markers during SARS-COV-2 viral infection

Severe viral infections, including SARS-COV-2, could trigger disruption of the balance between pro-oxidant and antioxidant mediators; the magnitude of which could reflect the severity of infection and lung injury. Using publicly available COVID-19 transcriptomic datasets, we conducted an in-silico a...

Descripción completa

Detalles Bibliográficos
Autores principales: Saheb Sharif-Askari, Narjes, Saheb Sharif-Askari, Fatemeh, Mdkhana, Bushra, Hussain Alsayed, Hawra Ali, Alsafar, Habiba, Alrais, Zeyad Faoor, Hamid, Qutayba, Halwani, Rabih
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8233550/
https://www.ncbi.nlm.nih.gov/pubmed/34186206
http://dx.doi.org/10.1016/j.freeradbiomed.2021.06.018
_version_ 1783713877714796544
author Saheb Sharif-Askari, Narjes
Saheb Sharif-Askari, Fatemeh
Mdkhana, Bushra
Hussain Alsayed, Hawra Ali
Alsafar, Habiba
Alrais, Zeyad Faoor
Hamid, Qutayba
Halwani, Rabih
author_facet Saheb Sharif-Askari, Narjes
Saheb Sharif-Askari, Fatemeh
Mdkhana, Bushra
Hussain Alsayed, Hawra Ali
Alsafar, Habiba
Alrais, Zeyad Faoor
Hamid, Qutayba
Halwani, Rabih
author_sort Saheb Sharif-Askari, Narjes
collection PubMed
description Severe viral infections, including SARS-COV-2, could trigger disruption of the balance between pro-oxidant and antioxidant mediators; the magnitude of which could reflect the severity of infection and lung injury. Using publicly available COVID-19 transcriptomic datasets, we conducted an in-silico analyses to evaluate the expression levels of 125 oxidative stress genes, including 37 pro-oxidant genes, 32 oxidative-responsive genes, and 56 antioxidant genes. Seven oxidative stress genes were found to be upregulated in whole blood and lung autopsies (MPO, S100A8, S100A9, SRXN1, GCLM, SESN2, and TXN); these genes were higher in severe versus non-severe COVID-19 leucocytes. Oxidative genes were upregulated in inflammatory cells comprising macrophages and CD8(+) T cells isolated from bronchioalveolar fluid (BALF), and neutrophils isolated from peripheral blood. MPO, S100A8, and S100A9 were top most upregulated oxidative markers within COVID-19's lung autopsies, whole blood, leucocytes, BALF derived macrophages and circulating neutrophils. The calprotectin's, S100A8 and S100A9 were upregulated in SARS-COV-2 infected human lung epithelium. To validate our in-silico analysis, we conducted qRT-PCR to measure MPO and calprotectin's levels in blood and saliva samples. Relative to uninfected donor controls, MPO, S100A8 and S100A9 were significantly higher in blood and saliva of severe versus asymptomatic COVID-19 patients. Compared to other different viral respiratory infections, coronavirus infection showed a prominent upregulation in oxidative stress genes with MPO and calprotectin at the top of the list. In conclusion, SARS-COV-2 induce the expression of oxidative stress genes via both immune as well as lung structural cells. The observed correlation between oxidative stress genes dysregulation and COVID-19 disease severity deserve more attention. Mechanistical studies are required to confirm the correlation between oxidative stress gene dysregulation, COVID-19 severity, and the net oxidative stress balance.
format Online
Article
Text
id pubmed-8233550
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Elsevier Inc.
record_format MEDLINE/PubMed
spelling pubmed-82335502021-06-28 Upregulation of oxidative stress gene markers during SARS-COV-2 viral infection Saheb Sharif-Askari, Narjes Saheb Sharif-Askari, Fatemeh Mdkhana, Bushra Hussain Alsayed, Hawra Ali Alsafar, Habiba Alrais, Zeyad Faoor Hamid, Qutayba Halwani, Rabih Free Radic Biol Med Article Severe viral infections, including SARS-COV-2, could trigger disruption of the balance between pro-oxidant and antioxidant mediators; the magnitude of which could reflect the severity of infection and lung injury. Using publicly available COVID-19 transcriptomic datasets, we conducted an in-silico analyses to evaluate the expression levels of 125 oxidative stress genes, including 37 pro-oxidant genes, 32 oxidative-responsive genes, and 56 antioxidant genes. Seven oxidative stress genes were found to be upregulated in whole blood and lung autopsies (MPO, S100A8, S100A9, SRXN1, GCLM, SESN2, and TXN); these genes were higher in severe versus non-severe COVID-19 leucocytes. Oxidative genes were upregulated in inflammatory cells comprising macrophages and CD8(+) T cells isolated from bronchioalveolar fluid (BALF), and neutrophils isolated from peripheral blood. MPO, S100A8, and S100A9 were top most upregulated oxidative markers within COVID-19's lung autopsies, whole blood, leucocytes, BALF derived macrophages and circulating neutrophils. The calprotectin's, S100A8 and S100A9 were upregulated in SARS-COV-2 infected human lung epithelium. To validate our in-silico analysis, we conducted qRT-PCR to measure MPO and calprotectin's levels in blood and saliva samples. Relative to uninfected donor controls, MPO, S100A8 and S100A9 were significantly higher in blood and saliva of severe versus asymptomatic COVID-19 patients. Compared to other different viral respiratory infections, coronavirus infection showed a prominent upregulation in oxidative stress genes with MPO and calprotectin at the top of the list. In conclusion, SARS-COV-2 induce the expression of oxidative stress genes via both immune as well as lung structural cells. The observed correlation between oxidative stress genes dysregulation and COVID-19 disease severity deserve more attention. Mechanistical studies are required to confirm the correlation between oxidative stress gene dysregulation, COVID-19 severity, and the net oxidative stress balance. Elsevier Inc. 2021-08-20 2021-06-26 /pmc/articles/PMC8233550/ /pubmed/34186206 http://dx.doi.org/10.1016/j.freeradbiomed.2021.06.018 Text en © 2021 Elsevier Inc. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Saheb Sharif-Askari, Narjes
Saheb Sharif-Askari, Fatemeh
Mdkhana, Bushra
Hussain Alsayed, Hawra Ali
Alsafar, Habiba
Alrais, Zeyad Faoor
Hamid, Qutayba
Halwani, Rabih
Upregulation of oxidative stress gene markers during SARS-COV-2 viral infection
title Upregulation of oxidative stress gene markers during SARS-COV-2 viral infection
title_full Upregulation of oxidative stress gene markers during SARS-COV-2 viral infection
title_fullStr Upregulation of oxidative stress gene markers during SARS-COV-2 viral infection
title_full_unstemmed Upregulation of oxidative stress gene markers during SARS-COV-2 viral infection
title_short Upregulation of oxidative stress gene markers during SARS-COV-2 viral infection
title_sort upregulation of oxidative stress gene markers during sars-cov-2 viral infection
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8233550/
https://www.ncbi.nlm.nih.gov/pubmed/34186206
http://dx.doi.org/10.1016/j.freeradbiomed.2021.06.018
work_keys_str_mv AT sahebsharifaskarinarjes upregulationofoxidativestressgenemarkersduringsarscov2viralinfection
AT sahebsharifaskarifatemeh upregulationofoxidativestressgenemarkersduringsarscov2viralinfection
AT mdkhanabushra upregulationofoxidativestressgenemarkersduringsarscov2viralinfection
AT hussainalsayedhawraali upregulationofoxidativestressgenemarkersduringsarscov2viralinfection
AT alsafarhabiba upregulationofoxidativestressgenemarkersduringsarscov2viralinfection
AT alraiszeyadfaoor upregulationofoxidativestressgenemarkersduringsarscov2viralinfection
AT hamidqutayba upregulationofoxidativestressgenemarkersduringsarscov2viralinfection
AT halwanirabih upregulationofoxidativestressgenemarkersduringsarscov2viralinfection