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A Machine Learning Approach to Study Demographic Alterations in Honeybee Colonies Using SDS–PAGE Fingerprinting

SIMPLE SUMMARY: Honeybees are vital pollinators for the human food chain. Colony depopulation is a serious threat to Apis mellifera populations and unfortunately it is also one of the most elusive and difficult to study. This research deals with the problem at its foundation: population imbalances....

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Autores principales: Cabbri, Riccardo, Ferlizza, Enea, Bellei, Elisa, Andreani, Giulia, Galuppi, Roberta, Isani, Gloria
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8233723/
https://www.ncbi.nlm.nih.gov/pubmed/34207270
http://dx.doi.org/10.3390/ani11061823
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author Cabbri, Riccardo
Ferlizza, Enea
Bellei, Elisa
Andreani, Giulia
Galuppi, Roberta
Isani, Gloria
author_facet Cabbri, Riccardo
Ferlizza, Enea
Bellei, Elisa
Andreani, Giulia
Galuppi, Roberta
Isani, Gloria
author_sort Cabbri, Riccardo
collection PubMed
description SIMPLE SUMMARY: Honeybees are vital pollinators for the human food chain. Colony depopulation is a serious threat to Apis mellifera populations and unfortunately it is also one of the most elusive and difficult to study. This research deals with the problem at its foundation: population imbalances. The proposed method allows to discriminate, with remarkably good performances, precocious foragers from proper aged ones using SDS-PAGE patterns of haemolymph proteins. Implications and future perspectives are discussed. ABSTRACT: Honeybees, as social insects, live in highly organised colonies where tasks reflect the age of individuals. As is widely known, in this context, emergent properties arise from interactions between them. The accelerated maturation of nurses into foragers, stimulated by many negative factors, may disrupt this complex equilibrium. This complexity needs a paradigm shift: from the study of a single stressor to the study of the effects exerted by multiple stressors on colony homeostasis. The aim of this research is, therefore, to study colony population disturbances by discriminating overaged nurses from proper aged nurses and precocious foragers from proper aged foragers using SDS-PAGE patterns of haemolymph proteins and a machine-learning algorithm. The KNN (K Nearest Neighbours) model fitted on the forager dataset showed remarkably good performances (accuracy 0.93, sensitivity 0.88, specificity 1.00) in discriminating precocious foragers from proper aged ones. The main strength of this innovative approach lies in the possibility of it being deployed as a preventive tool. Depopulation is an elusive syndrome in bee pathology and early detection with the method described could shed more light on the phenomenon. In addition, it enables countermeasures to revert this vicious circle.
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spelling pubmed-82337232021-06-27 A Machine Learning Approach to Study Demographic Alterations in Honeybee Colonies Using SDS–PAGE Fingerprinting Cabbri, Riccardo Ferlizza, Enea Bellei, Elisa Andreani, Giulia Galuppi, Roberta Isani, Gloria Animals (Basel) Article SIMPLE SUMMARY: Honeybees are vital pollinators for the human food chain. Colony depopulation is a serious threat to Apis mellifera populations and unfortunately it is also one of the most elusive and difficult to study. This research deals with the problem at its foundation: population imbalances. The proposed method allows to discriminate, with remarkably good performances, precocious foragers from proper aged ones using SDS-PAGE patterns of haemolymph proteins. Implications and future perspectives are discussed. ABSTRACT: Honeybees, as social insects, live in highly organised colonies where tasks reflect the age of individuals. As is widely known, in this context, emergent properties arise from interactions between them. The accelerated maturation of nurses into foragers, stimulated by many negative factors, may disrupt this complex equilibrium. This complexity needs a paradigm shift: from the study of a single stressor to the study of the effects exerted by multiple stressors on colony homeostasis. The aim of this research is, therefore, to study colony population disturbances by discriminating overaged nurses from proper aged nurses and precocious foragers from proper aged foragers using SDS-PAGE patterns of haemolymph proteins and a machine-learning algorithm. The KNN (K Nearest Neighbours) model fitted on the forager dataset showed remarkably good performances (accuracy 0.93, sensitivity 0.88, specificity 1.00) in discriminating precocious foragers from proper aged ones. The main strength of this innovative approach lies in the possibility of it being deployed as a preventive tool. Depopulation is an elusive syndrome in bee pathology and early detection with the method described could shed more light on the phenomenon. In addition, it enables countermeasures to revert this vicious circle. MDPI 2021-06-18 /pmc/articles/PMC8233723/ /pubmed/34207270 http://dx.doi.org/10.3390/ani11061823 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Cabbri, Riccardo
Ferlizza, Enea
Bellei, Elisa
Andreani, Giulia
Galuppi, Roberta
Isani, Gloria
A Machine Learning Approach to Study Demographic Alterations in Honeybee Colonies Using SDS–PAGE Fingerprinting
title A Machine Learning Approach to Study Demographic Alterations in Honeybee Colonies Using SDS–PAGE Fingerprinting
title_full A Machine Learning Approach to Study Demographic Alterations in Honeybee Colonies Using SDS–PAGE Fingerprinting
title_fullStr A Machine Learning Approach to Study Demographic Alterations in Honeybee Colonies Using SDS–PAGE Fingerprinting
title_full_unstemmed A Machine Learning Approach to Study Demographic Alterations in Honeybee Colonies Using SDS–PAGE Fingerprinting
title_short A Machine Learning Approach to Study Demographic Alterations in Honeybee Colonies Using SDS–PAGE Fingerprinting
title_sort machine learning approach to study demographic alterations in honeybee colonies using sds–page fingerprinting
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8233723/
https://www.ncbi.nlm.nih.gov/pubmed/34207270
http://dx.doi.org/10.3390/ani11061823
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