Cargando…
A Multi-Scale and Multi-Level Fusion Approach for Deep Learning-Based Liver Lesion Diagnosis in Magnetic Resonance Images with Visual Explanation
Many computer-aided diagnosis methods, especially ones with deep learning strategies, of liver cancers based on medical images have been proposed. However, most of such methods analyze the images under only one scale, and the deep learning models are always unexplainable. In this paper, we propose a...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8234101/ https://www.ncbi.nlm.nih.gov/pubmed/34207262 http://dx.doi.org/10.3390/life11060582 |
_version_ | 1783714005068546048 |
---|---|
author | Wan, Yuchai Zheng, Zhongshu Liu, Ran Zhu, Zheng Zhou, Hongen Zhang, Xun Boumaraf, Said |
author_facet | Wan, Yuchai Zheng, Zhongshu Liu, Ran Zhu, Zheng Zhou, Hongen Zhang, Xun Boumaraf, Said |
author_sort | Wan, Yuchai |
collection | PubMed |
description | Many computer-aided diagnosis methods, especially ones with deep learning strategies, of liver cancers based on medical images have been proposed. However, most of such methods analyze the images under only one scale, and the deep learning models are always unexplainable. In this paper, we propose a deep learning-based multi-scale and multi-level fusing approach of CNNs for liver lesion diagnosis on magnetic resonance images, termed as MMF-CNN. We introduce a multi-scale representation strategy to encode both the local and semi-local complementary information of the images. To take advantage of the complementary information of multi-scale representations, we propose a multi-level fusion method to combine the information of both the feature level and the decision level hierarchically and generate a robust diagnostic classifier based on deep learning. We further explore the explanation of the diagnosis decision of the deep neural network through visualizing the areas of interest of the network. A new scoring method is designed to evaluate whether the attention maps can highlight the relevant radiological features. The explanation and visualization make the decision-making process of the deep neural network transparent for the clinicians. We apply our proposed approach to various state-of-the-art deep learning architectures. The experimental results demonstrate the effectiveness of our approach. |
format | Online Article Text |
id | pubmed-8234101 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-82341012021-06-27 A Multi-Scale and Multi-Level Fusion Approach for Deep Learning-Based Liver Lesion Diagnosis in Magnetic Resonance Images with Visual Explanation Wan, Yuchai Zheng, Zhongshu Liu, Ran Zhu, Zheng Zhou, Hongen Zhang, Xun Boumaraf, Said Life (Basel) Article Many computer-aided diagnosis methods, especially ones with deep learning strategies, of liver cancers based on medical images have been proposed. However, most of such methods analyze the images under only one scale, and the deep learning models are always unexplainable. In this paper, we propose a deep learning-based multi-scale and multi-level fusing approach of CNNs for liver lesion diagnosis on magnetic resonance images, termed as MMF-CNN. We introduce a multi-scale representation strategy to encode both the local and semi-local complementary information of the images. To take advantage of the complementary information of multi-scale representations, we propose a multi-level fusion method to combine the information of both the feature level and the decision level hierarchically and generate a robust diagnostic classifier based on deep learning. We further explore the explanation of the diagnosis decision of the deep neural network through visualizing the areas of interest of the network. A new scoring method is designed to evaluate whether the attention maps can highlight the relevant radiological features. The explanation and visualization make the decision-making process of the deep neural network transparent for the clinicians. We apply our proposed approach to various state-of-the-art deep learning architectures. The experimental results demonstrate the effectiveness of our approach. MDPI 2021-06-18 /pmc/articles/PMC8234101/ /pubmed/34207262 http://dx.doi.org/10.3390/life11060582 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Wan, Yuchai Zheng, Zhongshu Liu, Ran Zhu, Zheng Zhou, Hongen Zhang, Xun Boumaraf, Said A Multi-Scale and Multi-Level Fusion Approach for Deep Learning-Based Liver Lesion Diagnosis in Magnetic Resonance Images with Visual Explanation |
title | A Multi-Scale and Multi-Level Fusion Approach for Deep Learning-Based Liver Lesion Diagnosis in Magnetic Resonance Images with Visual Explanation |
title_full | A Multi-Scale and Multi-Level Fusion Approach for Deep Learning-Based Liver Lesion Diagnosis in Magnetic Resonance Images with Visual Explanation |
title_fullStr | A Multi-Scale and Multi-Level Fusion Approach for Deep Learning-Based Liver Lesion Diagnosis in Magnetic Resonance Images with Visual Explanation |
title_full_unstemmed | A Multi-Scale and Multi-Level Fusion Approach for Deep Learning-Based Liver Lesion Diagnosis in Magnetic Resonance Images with Visual Explanation |
title_short | A Multi-Scale and Multi-Level Fusion Approach for Deep Learning-Based Liver Lesion Diagnosis in Magnetic Resonance Images with Visual Explanation |
title_sort | multi-scale and multi-level fusion approach for deep learning-based liver lesion diagnosis in magnetic resonance images with visual explanation |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8234101/ https://www.ncbi.nlm.nih.gov/pubmed/34207262 http://dx.doi.org/10.3390/life11060582 |
work_keys_str_mv | AT wanyuchai amultiscaleandmultilevelfusionapproachfordeeplearningbasedliverlesiondiagnosisinmagneticresonanceimageswithvisualexplanation AT zhengzhongshu amultiscaleandmultilevelfusionapproachfordeeplearningbasedliverlesiondiagnosisinmagneticresonanceimageswithvisualexplanation AT liuran amultiscaleandmultilevelfusionapproachfordeeplearningbasedliverlesiondiagnosisinmagneticresonanceimageswithvisualexplanation AT zhuzheng amultiscaleandmultilevelfusionapproachfordeeplearningbasedliverlesiondiagnosisinmagneticresonanceimageswithvisualexplanation AT zhouhongen amultiscaleandmultilevelfusionapproachfordeeplearningbasedliverlesiondiagnosisinmagneticresonanceimageswithvisualexplanation AT zhangxun amultiscaleandmultilevelfusionapproachfordeeplearningbasedliverlesiondiagnosisinmagneticresonanceimageswithvisualexplanation AT boumarafsaid amultiscaleandmultilevelfusionapproachfordeeplearningbasedliverlesiondiagnosisinmagneticresonanceimageswithvisualexplanation AT wanyuchai multiscaleandmultilevelfusionapproachfordeeplearningbasedliverlesiondiagnosisinmagneticresonanceimageswithvisualexplanation AT zhengzhongshu multiscaleandmultilevelfusionapproachfordeeplearningbasedliverlesiondiagnosisinmagneticresonanceimageswithvisualexplanation AT liuran multiscaleandmultilevelfusionapproachfordeeplearningbasedliverlesiondiagnosisinmagneticresonanceimageswithvisualexplanation AT zhuzheng multiscaleandmultilevelfusionapproachfordeeplearningbasedliverlesiondiagnosisinmagneticresonanceimageswithvisualexplanation AT zhouhongen multiscaleandmultilevelfusionapproachfordeeplearningbasedliverlesiondiagnosisinmagneticresonanceimageswithvisualexplanation AT zhangxun multiscaleandmultilevelfusionapproachfordeeplearningbasedliverlesiondiagnosisinmagneticresonanceimageswithvisualexplanation AT boumarafsaid multiscaleandmultilevelfusionapproachfordeeplearningbasedliverlesiondiagnosisinmagneticresonanceimageswithvisualexplanation |