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LED control of gene expression in a nanobiosystem composed of metallic nanoparticles and a genetically modified E. coli strain

BACKGROUND: Within the last decade, genetic engineering and synthetic biology have revolutionized society´s ability to mass-produce complex biological products within genetically-modified microorganisms containing elegantly designed genetic circuitry. However, many challenges still exist in developi...

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Autores principales: Aratboni, Hossein Alishah, Rafiei, Nahid, Khorashad, Larousse Khosravi, Lerma-Escalera, Albert Isaac, Balderas-Cisneros, Francisco de Jesús, Liu, Zhaowei, Alemzadeh, Abbas, Shaji, Sadasivan, Morones-Ramírez, José Ruben
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8236197/
https://www.ncbi.nlm.nih.gov/pubmed/34174890
http://dx.doi.org/10.1186/s12951-021-00937-x
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author Aratboni, Hossein Alishah
Rafiei, Nahid
Khorashad, Larousse Khosravi
Lerma-Escalera, Albert Isaac
Balderas-Cisneros, Francisco de Jesús
Liu, Zhaowei
Alemzadeh, Abbas
Shaji, Sadasivan
Morones-Ramírez, José Ruben
author_facet Aratboni, Hossein Alishah
Rafiei, Nahid
Khorashad, Larousse Khosravi
Lerma-Escalera, Albert Isaac
Balderas-Cisneros, Francisco de Jesús
Liu, Zhaowei
Alemzadeh, Abbas
Shaji, Sadasivan
Morones-Ramírez, José Ruben
author_sort Aratboni, Hossein Alishah
collection PubMed
description BACKGROUND: Within the last decade, genetic engineering and synthetic biology have revolutionized society´s ability to mass-produce complex biological products within genetically-modified microorganisms containing elegantly designed genetic circuitry. However, many challenges still exist in developing bioproduction processes involving genetically modified microorganisms with complex or multiple gene circuits. These challenges include the development of external gene expression regulation methods with the following characteristics: spatial–temporal control and scalability, while inducing minimal permanent or irreversible system-wide conditions. Different stimuli have been used to control gene expression and mitigate these challenges, and they can be characterized by the effect they produce in the culture media conditions. Invasive stimuli that cause permanent, irreversible changes (pH and chemical inducers), non-invasive stimuli that cause partially reversible changes (temperature), and non-invasive stimuli that cause reversible changes in the media conditions (ultrasound, magnetic fields, and light). METHODS: Opto-control of gene expression is a non-invasive external trigger that complies with most of the desired characteristics of an external control system. However, the disadvantage relies on the design of the biological photoreceptors and the necessity to design them to respond to a different wavelength for every bioprocess needed to be controlled or regulated in the microorganism. Therefore, this work proposes using biocompatible metallic nanoparticles as external controllers of gene expression, based on their ability to convert light into heat and the capacity of nanotechnology to easily design a wide array of nanostructures capable of absorbing light at different wavelengths and inducing plasmonic photothermal heating. RESULTS: Here, we designed a nanobiosystem that can be opto-thermally triggered using LED light. The nanobiosystem is composed of biocompatible gold nanoparticles and a genetically modified E. coli with a plasmid that allows mCherry fluorescent protein production at 37 °C in response to an RNA thermometer. CONCLUSIONS: The LED-triggered photothermal protein production system here designed offers a new, cheaper, scalable switchable method, non-destructive for living organisms, and contribute toward the evolution of bioprocess production systems. [Image: see text] SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12951-021-00937-x.
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spelling pubmed-82361972021-06-28 LED control of gene expression in a nanobiosystem composed of metallic nanoparticles and a genetically modified E. coli strain Aratboni, Hossein Alishah Rafiei, Nahid Khorashad, Larousse Khosravi Lerma-Escalera, Albert Isaac Balderas-Cisneros, Francisco de Jesús Liu, Zhaowei Alemzadeh, Abbas Shaji, Sadasivan Morones-Ramírez, José Ruben J Nanobiotechnology Research BACKGROUND: Within the last decade, genetic engineering and synthetic biology have revolutionized society´s ability to mass-produce complex biological products within genetically-modified microorganisms containing elegantly designed genetic circuitry. However, many challenges still exist in developing bioproduction processes involving genetically modified microorganisms with complex or multiple gene circuits. These challenges include the development of external gene expression regulation methods with the following characteristics: spatial–temporal control and scalability, while inducing minimal permanent or irreversible system-wide conditions. Different stimuli have been used to control gene expression and mitigate these challenges, and they can be characterized by the effect they produce in the culture media conditions. Invasive stimuli that cause permanent, irreversible changes (pH and chemical inducers), non-invasive stimuli that cause partially reversible changes (temperature), and non-invasive stimuli that cause reversible changes in the media conditions (ultrasound, magnetic fields, and light). METHODS: Opto-control of gene expression is a non-invasive external trigger that complies with most of the desired characteristics of an external control system. However, the disadvantage relies on the design of the biological photoreceptors and the necessity to design them to respond to a different wavelength for every bioprocess needed to be controlled or regulated in the microorganism. Therefore, this work proposes using biocompatible metallic nanoparticles as external controllers of gene expression, based on their ability to convert light into heat and the capacity of nanotechnology to easily design a wide array of nanostructures capable of absorbing light at different wavelengths and inducing plasmonic photothermal heating. RESULTS: Here, we designed a nanobiosystem that can be opto-thermally triggered using LED light. The nanobiosystem is composed of biocompatible gold nanoparticles and a genetically modified E. coli with a plasmid that allows mCherry fluorescent protein production at 37 °C in response to an RNA thermometer. CONCLUSIONS: The LED-triggered photothermal protein production system here designed offers a new, cheaper, scalable switchable method, non-destructive for living organisms, and contribute toward the evolution of bioprocess production systems. [Image: see text] SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12951-021-00937-x. BioMed Central 2021-06-26 /pmc/articles/PMC8236197/ /pubmed/34174890 http://dx.doi.org/10.1186/s12951-021-00937-x Text en © The Author(s) 2022, corrected publication 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Aratboni, Hossein Alishah
Rafiei, Nahid
Khorashad, Larousse Khosravi
Lerma-Escalera, Albert Isaac
Balderas-Cisneros, Francisco de Jesús
Liu, Zhaowei
Alemzadeh, Abbas
Shaji, Sadasivan
Morones-Ramírez, José Ruben
LED control of gene expression in a nanobiosystem composed of metallic nanoparticles and a genetically modified E. coli strain
title LED control of gene expression in a nanobiosystem composed of metallic nanoparticles and a genetically modified E. coli strain
title_full LED control of gene expression in a nanobiosystem composed of metallic nanoparticles and a genetically modified E. coli strain
title_fullStr LED control of gene expression in a nanobiosystem composed of metallic nanoparticles and a genetically modified E. coli strain
title_full_unstemmed LED control of gene expression in a nanobiosystem composed of metallic nanoparticles and a genetically modified E. coli strain
title_short LED control of gene expression in a nanobiosystem composed of metallic nanoparticles and a genetically modified E. coli strain
title_sort led control of gene expression in a nanobiosystem composed of metallic nanoparticles and a genetically modified e. coli strain
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8236197/
https://www.ncbi.nlm.nih.gov/pubmed/34174890
http://dx.doi.org/10.1186/s12951-021-00937-x
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