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Deep Multiview Image Fusion for Soybean Yield Estimation in Breeding Applications

Reliable seed yield estimation is an indispensable step in plant breeding programs geared towards cultivar development in major row crops. The objective of this study is to develop a machine learning (ML) approach adept at soybean (Glycine max L. (Merr.)) pod counting to enable genotype seed yield r...

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Autores principales: Riera, Luis G., Carroll, Matthew E., Zhang, Zhisheng, Shook, Johnathon M., Ghosal, Sambuddha, Gao, Tianshuang, Singh, Arti, Bhattacharya, Sourabh, Ganapathysubramanian, Baskar, Singh, Asheesh K., Sarkar, Soumik
Formato: Online Artículo Texto
Lenguaje:English
Publicado: AAAS 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8240512/
https://www.ncbi.nlm.nih.gov/pubmed/34250507
http://dx.doi.org/10.34133/2021/9846470
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author Riera, Luis G.
Carroll, Matthew E.
Zhang, Zhisheng
Shook, Johnathon M.
Ghosal, Sambuddha
Gao, Tianshuang
Singh, Arti
Bhattacharya, Sourabh
Ganapathysubramanian, Baskar
Singh, Asheesh K.
Sarkar, Soumik
author_facet Riera, Luis G.
Carroll, Matthew E.
Zhang, Zhisheng
Shook, Johnathon M.
Ghosal, Sambuddha
Gao, Tianshuang
Singh, Arti
Bhattacharya, Sourabh
Ganapathysubramanian, Baskar
Singh, Asheesh K.
Sarkar, Soumik
author_sort Riera, Luis G.
collection PubMed
description Reliable seed yield estimation is an indispensable step in plant breeding programs geared towards cultivar development in major row crops. The objective of this study is to develop a machine learning (ML) approach adept at soybean (Glycine max L. (Merr.)) pod counting to enable genotype seed yield rank prediction from in-field video data collected by a ground robot. To meet this goal, we developed a multiview image-based yield estimation framework utilizing deep learning architectures. Plant images captured from different angles were fused to estimate the yield and subsequently to rank soybean genotypes for application in breeding decisions. We used data from controlled imaging environment in field, as well as from plant breeding test plots in field to demonstrate the efficacy of our framework via comparing performance with manual pod counting and yield estimation. Our results demonstrate the promise of ML models in making breeding decisions with significant reduction of time and human effort and opening new breeding method avenues to develop cultivars.
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spelling pubmed-82405122021-07-08 Deep Multiview Image Fusion for Soybean Yield Estimation in Breeding Applications Riera, Luis G. Carroll, Matthew E. Zhang, Zhisheng Shook, Johnathon M. Ghosal, Sambuddha Gao, Tianshuang Singh, Arti Bhattacharya, Sourabh Ganapathysubramanian, Baskar Singh, Asheesh K. Sarkar, Soumik Plant Phenomics Research Article Reliable seed yield estimation is an indispensable step in plant breeding programs geared towards cultivar development in major row crops. The objective of this study is to develop a machine learning (ML) approach adept at soybean (Glycine max L. (Merr.)) pod counting to enable genotype seed yield rank prediction from in-field video data collected by a ground robot. To meet this goal, we developed a multiview image-based yield estimation framework utilizing deep learning architectures. Plant images captured from different angles were fused to estimate the yield and subsequently to rank soybean genotypes for application in breeding decisions. We used data from controlled imaging environment in field, as well as from plant breeding test plots in field to demonstrate the efficacy of our framework via comparing performance with manual pod counting and yield estimation. Our results demonstrate the promise of ML models in making breeding decisions with significant reduction of time and human effort and opening new breeding method avenues to develop cultivars. AAAS 2021-06-23 /pmc/articles/PMC8240512/ /pubmed/34250507 http://dx.doi.org/10.34133/2021/9846470 Text en Copyright © 2021 Luis G. Riera et al. https://creativecommons.org/licenses/by/4.0/Exclusive Licensee Nanjing Agricultural University. Distributed under a Creative Commons Attribution License (CC BY 4.0).
spellingShingle Research Article
Riera, Luis G.
Carroll, Matthew E.
Zhang, Zhisheng
Shook, Johnathon M.
Ghosal, Sambuddha
Gao, Tianshuang
Singh, Arti
Bhattacharya, Sourabh
Ganapathysubramanian, Baskar
Singh, Asheesh K.
Sarkar, Soumik
Deep Multiview Image Fusion for Soybean Yield Estimation in Breeding Applications
title Deep Multiview Image Fusion for Soybean Yield Estimation in Breeding Applications
title_full Deep Multiview Image Fusion for Soybean Yield Estimation in Breeding Applications
title_fullStr Deep Multiview Image Fusion for Soybean Yield Estimation in Breeding Applications
title_full_unstemmed Deep Multiview Image Fusion for Soybean Yield Estimation in Breeding Applications
title_short Deep Multiview Image Fusion for Soybean Yield Estimation in Breeding Applications
title_sort deep multiview image fusion for soybean yield estimation in breeding applications
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8240512/
https://www.ncbi.nlm.nih.gov/pubmed/34250507
http://dx.doi.org/10.34133/2021/9846470
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