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Deep learning to predict long-term mortality in patients requiring 7 days of mechanical ventilation

BACKGROUND: Among patients with acute respiratory failure requiring prolonged mechanical ventilation, tracheostomies are typically placed after approximately 7 to 10 days. Yet half of patients admitted to the intensive care unit receiving tracheostomy will die within a year, often within three month...

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Autores principales: George, Naomi, Moseley, Edward, Eber, Rene, Siu, Jennifer, Samuel, Mathew, Yam, Jonathan, Huang, Kexin, Celi, Leo Anthony, Lindvall, Charlotta
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8241081/
https://www.ncbi.nlm.nih.gov/pubmed/34185798
http://dx.doi.org/10.1371/journal.pone.0253443
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author George, Naomi
Moseley, Edward
Eber, Rene
Siu, Jennifer
Samuel, Mathew
Yam, Jonathan
Huang, Kexin
Celi, Leo Anthony
Lindvall, Charlotta
author_facet George, Naomi
Moseley, Edward
Eber, Rene
Siu, Jennifer
Samuel, Mathew
Yam, Jonathan
Huang, Kexin
Celi, Leo Anthony
Lindvall, Charlotta
author_sort George, Naomi
collection PubMed
description BACKGROUND: Among patients with acute respiratory failure requiring prolonged mechanical ventilation, tracheostomies are typically placed after approximately 7 to 10 days. Yet half of patients admitted to the intensive care unit receiving tracheostomy will die within a year, often within three months. Existing mortality prediction models for prolonged mechanical ventilation, such as the ProVent Score, have poor sensitivity and are not applied until after 14 days of mechanical ventilation. We developed a model to predict 3-month mortality in patients requiring more than 7 days of mechanical ventilation using deep learning techniques and compared this to existing mortality models. METHODS: Retrospective cohort study. Setting: The Medical Information Mart for Intensive Care III Database. Patients: All adults requiring ≥ 7 days of mechanical ventilation. Measurements: A neural network model for 3-month mortality was created using process-of-care variables, including demographic, physiologic and clinical data. The area under the receiver operator curve (AUROC) was compared to the ProVent model at predicting 3 and 12-month mortality. Shapley values were used to identify the variables with the greatest contributions to the model. RESULTS: There were 4,334 encounters divided into a development cohort (n = 3467) and a testing cohort (n = 867). The final deep learning model included 250 variables and had an AUROC of 0.74 for predicting 3-month mortality at day 7 of mechanical ventilation versus 0.59 for the ProVent model. Older age and elevated Simplified Acute Physiology Score II (SAPS II) Score on intensive care unit admission had the largest contribution to predicting mortality. DISCUSSION: We developed a deep learning prediction model for 3-month mortality among patients requiring ≥ 7 days of mechanical ventilation using a neural network approach utilizing readily available clinical variables. The model outperforms the ProVent model for predicting mortality among patients requiring ≥ 7 days of mechanical ventilation. This model requires external validation.
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spelling pubmed-82410812021-07-09 Deep learning to predict long-term mortality in patients requiring 7 days of mechanical ventilation George, Naomi Moseley, Edward Eber, Rene Siu, Jennifer Samuel, Mathew Yam, Jonathan Huang, Kexin Celi, Leo Anthony Lindvall, Charlotta PLoS One Research Article BACKGROUND: Among patients with acute respiratory failure requiring prolonged mechanical ventilation, tracheostomies are typically placed after approximately 7 to 10 days. Yet half of patients admitted to the intensive care unit receiving tracheostomy will die within a year, often within three months. Existing mortality prediction models for prolonged mechanical ventilation, such as the ProVent Score, have poor sensitivity and are not applied until after 14 days of mechanical ventilation. We developed a model to predict 3-month mortality in patients requiring more than 7 days of mechanical ventilation using deep learning techniques and compared this to existing mortality models. METHODS: Retrospective cohort study. Setting: The Medical Information Mart for Intensive Care III Database. Patients: All adults requiring ≥ 7 days of mechanical ventilation. Measurements: A neural network model for 3-month mortality was created using process-of-care variables, including demographic, physiologic and clinical data. The area under the receiver operator curve (AUROC) was compared to the ProVent model at predicting 3 and 12-month mortality. Shapley values were used to identify the variables with the greatest contributions to the model. RESULTS: There were 4,334 encounters divided into a development cohort (n = 3467) and a testing cohort (n = 867). The final deep learning model included 250 variables and had an AUROC of 0.74 for predicting 3-month mortality at day 7 of mechanical ventilation versus 0.59 for the ProVent model. Older age and elevated Simplified Acute Physiology Score II (SAPS II) Score on intensive care unit admission had the largest contribution to predicting mortality. DISCUSSION: We developed a deep learning prediction model for 3-month mortality among patients requiring ≥ 7 days of mechanical ventilation using a neural network approach utilizing readily available clinical variables. The model outperforms the ProVent model for predicting mortality among patients requiring ≥ 7 days of mechanical ventilation. This model requires external validation. Public Library of Science 2021-06-29 /pmc/articles/PMC8241081/ /pubmed/34185798 http://dx.doi.org/10.1371/journal.pone.0253443 Text en © 2021 George et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
George, Naomi
Moseley, Edward
Eber, Rene
Siu, Jennifer
Samuel, Mathew
Yam, Jonathan
Huang, Kexin
Celi, Leo Anthony
Lindvall, Charlotta
Deep learning to predict long-term mortality in patients requiring 7 days of mechanical ventilation
title Deep learning to predict long-term mortality in patients requiring 7 days of mechanical ventilation
title_full Deep learning to predict long-term mortality in patients requiring 7 days of mechanical ventilation
title_fullStr Deep learning to predict long-term mortality in patients requiring 7 days of mechanical ventilation
title_full_unstemmed Deep learning to predict long-term mortality in patients requiring 7 days of mechanical ventilation
title_short Deep learning to predict long-term mortality in patients requiring 7 days of mechanical ventilation
title_sort deep learning to predict long-term mortality in patients requiring 7 days of mechanical ventilation
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8241081/
https://www.ncbi.nlm.nih.gov/pubmed/34185798
http://dx.doi.org/10.1371/journal.pone.0253443
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