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COVID-19 discrimination framework for X-ray images by considering radiomics, selective information, feature ranking, and a novel hybrid classifier()
In medical imaging procedures for the detection of coronavirus, apart from medical tests, approval of diagnosis has special significance. Imaging procedures are also useful for detecting the damage caused by COVID-19. Chest X-ray imaging is frequently used to diagnose COVID-19 and different pneumoni...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier B.V.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8241421/ https://www.ncbi.nlm.nih.gov/pubmed/34219966 http://dx.doi.org/10.1016/j.image.2021.116359 |
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author | Koyuncu, Hasan Barstuğan, Mücahid |
author_facet | Koyuncu, Hasan Barstuğan, Mücahid |
author_sort | Koyuncu, Hasan |
collection | PubMed |
description | In medical imaging procedures for the detection of coronavirus, apart from medical tests, approval of diagnosis has special significance. Imaging procedures are also useful for detecting the damage caused by COVID-19. Chest X-ray imaging is frequently used to diagnose COVID-19 and different pneumonias. This paper presents a task-specific framework to detect coronavirus in X-ray images. Binary classification of three different labels (healthy, bacterial pneumonia, and COVID-19) was performed on two differentiated data sets in which corona is stated as positive. First-order statistics, gray level co-occurrence matrix, gray level run length matrix, and gray level size zone matrix were analyzed to form fifteen sub-data sets and to ascertain the necessary radiomics. Two normalization methods are compared to make the data meaningful. Furthermore, five feature ranking approaches (Bhattacharyya, entropy, Roc, t-test, and Wilcoxon) are mentioned to provide necessary information to a state-of-the-art classifier based on Gauss-map-based chaotic particle swarm optimization and neural networks. The proposed framework was designed according to the analyses about radiomics, normalization approaches, and filter-based feature ranking methods. In experiments, seven metrics were evaluated to objectively determine the results: accuracy, area under the receiver operating characteristic (ROC) curve, sensitivity, specificity, g-mean, precision, and f-measure. The proposed framework showed promising scores on two X-ray-based data sets, especially with the accuracy and area under the ROC curve rates exceeding 99% for the classification of coronavirus vs. others. |
format | Online Article Text |
id | pubmed-8241421 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Elsevier B.V. |
record_format | MEDLINE/PubMed |
spelling | pubmed-82414212021-06-29 COVID-19 discrimination framework for X-ray images by considering radiomics, selective information, feature ranking, and a novel hybrid classifier() Koyuncu, Hasan Barstuğan, Mücahid Signal Process Image Commun Article In medical imaging procedures for the detection of coronavirus, apart from medical tests, approval of diagnosis has special significance. Imaging procedures are also useful for detecting the damage caused by COVID-19. Chest X-ray imaging is frequently used to diagnose COVID-19 and different pneumonias. This paper presents a task-specific framework to detect coronavirus in X-ray images. Binary classification of three different labels (healthy, bacterial pneumonia, and COVID-19) was performed on two differentiated data sets in which corona is stated as positive. First-order statistics, gray level co-occurrence matrix, gray level run length matrix, and gray level size zone matrix were analyzed to form fifteen sub-data sets and to ascertain the necessary radiomics. Two normalization methods are compared to make the data meaningful. Furthermore, five feature ranking approaches (Bhattacharyya, entropy, Roc, t-test, and Wilcoxon) are mentioned to provide necessary information to a state-of-the-art classifier based on Gauss-map-based chaotic particle swarm optimization and neural networks. The proposed framework was designed according to the analyses about radiomics, normalization approaches, and filter-based feature ranking methods. In experiments, seven metrics were evaluated to objectively determine the results: accuracy, area under the receiver operating characteristic (ROC) curve, sensitivity, specificity, g-mean, precision, and f-measure. The proposed framework showed promising scores on two X-ray-based data sets, especially with the accuracy and area under the ROC curve rates exceeding 99% for the classification of coronavirus vs. others. Elsevier B.V. 2021-09 2021-06-17 /pmc/articles/PMC8241421/ /pubmed/34219966 http://dx.doi.org/10.1016/j.image.2021.116359 Text en © 2021 Elsevier B.V. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active. |
spellingShingle | Article Koyuncu, Hasan Barstuğan, Mücahid COVID-19 discrimination framework for X-ray images by considering radiomics, selective information, feature ranking, and a novel hybrid classifier() |
title | COVID-19 discrimination framework for X-ray images by considering radiomics, selective information, feature ranking, and a novel hybrid classifier() |
title_full | COVID-19 discrimination framework for X-ray images by considering radiomics, selective information, feature ranking, and a novel hybrid classifier() |
title_fullStr | COVID-19 discrimination framework for X-ray images by considering radiomics, selective information, feature ranking, and a novel hybrid classifier() |
title_full_unstemmed | COVID-19 discrimination framework for X-ray images by considering radiomics, selective information, feature ranking, and a novel hybrid classifier() |
title_short | COVID-19 discrimination framework for X-ray images by considering radiomics, selective information, feature ranking, and a novel hybrid classifier() |
title_sort | covid-19 discrimination framework for x-ray images by considering radiomics, selective information, feature ranking, and a novel hybrid classifier() |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8241421/ https://www.ncbi.nlm.nih.gov/pubmed/34219966 http://dx.doi.org/10.1016/j.image.2021.116359 |
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