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Fast and accurate modeling of transient‐state, gradient‐spoiled sequences by recurrent neural networks
Fast and accurate modeling of MR signal responses are typically required for various quantitative MRI applications, such as MR fingerprinting. This work uses a new extended phase graph (EPG)‐Bloch model for accurate simulation of transient‐state, gradient‐spoiled MR sequences, and proposes a recurre...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8244023/ https://www.ncbi.nlm.nih.gov/pubmed/33949718 http://dx.doi.org/10.1002/nbm.4527 |
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author | Liu, Hongyan van der Heide, Oscar van den Berg, Cornelis A. T. Sbrizzi, Alessandro |
author_facet | Liu, Hongyan van der Heide, Oscar van den Berg, Cornelis A. T. Sbrizzi, Alessandro |
author_sort | Liu, Hongyan |
collection | PubMed |
description | Fast and accurate modeling of MR signal responses are typically required for various quantitative MRI applications, such as MR fingerprinting. This work uses a new extended phase graph (EPG)‐Bloch model for accurate simulation of transient‐state, gradient‐spoiled MR sequences, and proposes a recurrent neural network (RNN) as a fast surrogate of the EPG‐Bloch model for computing large‐scale MR signals and derivatives. The computational efficiency of the RNN model is demonstrated by comparisons with other existing models, showing one to three orders of acceleration compared with the latest GPU‐accelerated, open‐source EPG package. By using numerical and in vivo brain data, two used cases, namely, MRF dictionary generation and optimal experimental design, are also provided. Results show that the RNN surrogate model can be efficiently used for computing large‐scale dictionaries of transient‐state signals and derivatives within tens of seconds, resulting in several orders of magnitude acceleration with respect to state‐of‐the‐art implementations. The practical application of transient‐state quantitative techniques can therefore be substantially facilitated. |
format | Online Article Text |
id | pubmed-8244023 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-82440232021-07-02 Fast and accurate modeling of transient‐state, gradient‐spoiled sequences by recurrent neural networks Liu, Hongyan van der Heide, Oscar van den Berg, Cornelis A. T. Sbrizzi, Alessandro NMR Biomed Research Articles Fast and accurate modeling of MR signal responses are typically required for various quantitative MRI applications, such as MR fingerprinting. This work uses a new extended phase graph (EPG)‐Bloch model for accurate simulation of transient‐state, gradient‐spoiled MR sequences, and proposes a recurrent neural network (RNN) as a fast surrogate of the EPG‐Bloch model for computing large‐scale MR signals and derivatives. The computational efficiency of the RNN model is demonstrated by comparisons with other existing models, showing one to three orders of acceleration compared with the latest GPU‐accelerated, open‐source EPG package. By using numerical and in vivo brain data, two used cases, namely, MRF dictionary generation and optimal experimental design, are also provided. Results show that the RNN surrogate model can be efficiently used for computing large‐scale dictionaries of transient‐state signals and derivatives within tens of seconds, resulting in several orders of magnitude acceleration with respect to state‐of‐the‐art implementations. The practical application of transient‐state quantitative techniques can therefore be substantially facilitated. John Wiley and Sons Inc. 2021-05-05 2021-07 /pmc/articles/PMC8244023/ /pubmed/33949718 http://dx.doi.org/10.1002/nbm.4527 Text en © 2021 The Authors. NMR in Biomedicine published by John Wiley & Sons Ltd. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made. |
spellingShingle | Research Articles Liu, Hongyan van der Heide, Oscar van den Berg, Cornelis A. T. Sbrizzi, Alessandro Fast and accurate modeling of transient‐state, gradient‐spoiled sequences by recurrent neural networks |
title | Fast and accurate modeling of transient‐state, gradient‐spoiled sequences by recurrent neural networks |
title_full | Fast and accurate modeling of transient‐state, gradient‐spoiled sequences by recurrent neural networks |
title_fullStr | Fast and accurate modeling of transient‐state, gradient‐spoiled sequences by recurrent neural networks |
title_full_unstemmed | Fast and accurate modeling of transient‐state, gradient‐spoiled sequences by recurrent neural networks |
title_short | Fast and accurate modeling of transient‐state, gradient‐spoiled sequences by recurrent neural networks |
title_sort | fast and accurate modeling of transient‐state, gradient‐spoiled sequences by recurrent neural networks |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8244023/ https://www.ncbi.nlm.nih.gov/pubmed/33949718 http://dx.doi.org/10.1002/nbm.4527 |
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