The complete chloroplast genome sequence of Pennisetum centrasiaticum, a widespread grass in Tibet, China

The complete chloroplast genome of Pennisetum centrasiaticum was sequenced and reported here. The total genome size was 138,294 bp in length, containing a large single-copy region of 81,229 bp, a small single-copy region of 12,419 bp, and a pair of inverted repeat regions of 22,288 bp. The GC conten...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhang, Litian, Liu, Demei, Ma, Yushou, Yang, Shihai, Wang, Xiaoli, Wang, Yanlong, Dong, Ruizhen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8245088/
https://www.ncbi.nlm.nih.gov/pubmed/34250231
http://dx.doi.org/10.1080/23802359.2021.1903355
_version_ 1783716050586566656
author Zhang, Litian
Liu, Demei
Ma, Yushou
Yang, Shihai
Wang, Xiaoli
Wang, Yanlong
Dong, Ruizhen
author_facet Zhang, Litian
Liu, Demei
Ma, Yushou
Yang, Shihai
Wang, Xiaoli
Wang, Yanlong
Dong, Ruizhen
author_sort Zhang, Litian
collection PubMed
description The complete chloroplast genome of Pennisetum centrasiaticum was sequenced and reported here. The total genome size was 138,294 bp in length, containing a large single-copy region of 81,229 bp, a small single-copy region of 12,419 bp, and a pair of inverted repeat regions of 22,288 bp. The GC content of P. centrasiaticum chloroplast genome was 38.6%. It encodes a total of 119 unique genes, including 81 protein-coding genes, 34 tRNA genes, and four rRNA genes. Phylogenetic analysis showed a strong sister relationship with Cenchrus ciliaris and Cenchrus purpureus. Our findings provide fundamental information for further evolutionary and phylogenetic researches of P. centrasiaticum.
format Online
Article
Text
id pubmed-8245088
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-82450882021-07-09 The complete chloroplast genome sequence of Pennisetum centrasiaticum, a widespread grass in Tibet, China Zhang, Litian Liu, Demei Ma, Yushou Yang, Shihai Wang, Xiaoli Wang, Yanlong Dong, Ruizhen Mitochondrial DNA B Resour Mitogenome Announcement The complete chloroplast genome of Pennisetum centrasiaticum was sequenced and reported here. The total genome size was 138,294 bp in length, containing a large single-copy region of 81,229 bp, a small single-copy region of 12,419 bp, and a pair of inverted repeat regions of 22,288 bp. The GC content of P. centrasiaticum chloroplast genome was 38.6%. It encodes a total of 119 unique genes, including 81 protein-coding genes, 34 tRNA genes, and four rRNA genes. Phylogenetic analysis showed a strong sister relationship with Cenchrus ciliaris and Cenchrus purpureus. Our findings provide fundamental information for further evolutionary and phylogenetic researches of P. centrasiaticum. Taylor & Francis 2021-06-28 /pmc/articles/PMC8245088/ /pubmed/34250231 http://dx.doi.org/10.1080/23802359.2021.1903355 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Zhang, Litian
Liu, Demei
Ma, Yushou
Yang, Shihai
Wang, Xiaoli
Wang, Yanlong
Dong, Ruizhen
The complete chloroplast genome sequence of Pennisetum centrasiaticum, a widespread grass in Tibet, China
title The complete chloroplast genome sequence of Pennisetum centrasiaticum, a widespread grass in Tibet, China
title_full The complete chloroplast genome sequence of Pennisetum centrasiaticum, a widespread grass in Tibet, China
title_fullStr The complete chloroplast genome sequence of Pennisetum centrasiaticum, a widespread grass in Tibet, China
title_full_unstemmed The complete chloroplast genome sequence of Pennisetum centrasiaticum, a widespread grass in Tibet, China
title_short The complete chloroplast genome sequence of Pennisetum centrasiaticum, a widespread grass in Tibet, China
title_sort complete chloroplast genome sequence of pennisetum centrasiaticum, a widespread grass in tibet, china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8245088/
https://www.ncbi.nlm.nih.gov/pubmed/34250231
http://dx.doi.org/10.1080/23802359.2021.1903355
work_keys_str_mv AT zhanglitian thecompletechloroplastgenomesequenceofpennisetumcentrasiaticumawidespreadgrassintibetchina
AT liudemei thecompletechloroplastgenomesequenceofpennisetumcentrasiaticumawidespreadgrassintibetchina
AT mayushou thecompletechloroplastgenomesequenceofpennisetumcentrasiaticumawidespreadgrassintibetchina
AT yangshihai thecompletechloroplastgenomesequenceofpennisetumcentrasiaticumawidespreadgrassintibetchina
AT wangxiaoli thecompletechloroplastgenomesequenceofpennisetumcentrasiaticumawidespreadgrassintibetchina
AT wangyanlong thecompletechloroplastgenomesequenceofpennisetumcentrasiaticumawidespreadgrassintibetchina
AT dongruizhen thecompletechloroplastgenomesequenceofpennisetumcentrasiaticumawidespreadgrassintibetchina
AT zhanglitian completechloroplastgenomesequenceofpennisetumcentrasiaticumawidespreadgrassintibetchina
AT liudemei completechloroplastgenomesequenceofpennisetumcentrasiaticumawidespreadgrassintibetchina
AT mayushou completechloroplastgenomesequenceofpennisetumcentrasiaticumawidespreadgrassintibetchina
AT yangshihai completechloroplastgenomesequenceofpennisetumcentrasiaticumawidespreadgrassintibetchina
AT wangxiaoli completechloroplastgenomesequenceofpennisetumcentrasiaticumawidespreadgrassintibetchina
AT wangyanlong completechloroplastgenomesequenceofpennisetumcentrasiaticumawidespreadgrassintibetchina
AT dongruizhen completechloroplastgenomesequenceofpennisetumcentrasiaticumawidespreadgrassintibetchina

Ejemplares similares