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Target Adverse Event Profiles for Predictive Safety in the Postmarket Setting
We improved a previous pharmacological target adverse‐event (TAE) profile model to predict adverse events (AEs) on US Food and Drug Administration (FDA) drug labels at the time of approval. The new model uses more drugs and features for learning as well as a new algorithm. Comparator drugs sharing s...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8246740/ https://www.ncbi.nlm.nih.gov/pubmed/33090463 http://dx.doi.org/10.1002/cpt.2074 |
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author | Schotland, Peter Racz, Rebecca Jackson, David B. Soldatos, Theodoros G. Levin, Robert Strauss, David G. Burkhart, Keith |
author_facet | Schotland, Peter Racz, Rebecca Jackson, David B. Soldatos, Theodoros G. Levin, Robert Strauss, David G. Burkhart, Keith |
author_sort | Schotland, Peter |
collection | PubMed |
description | We improved a previous pharmacological target adverse‐event (TAE) profile model to predict adverse events (AEs) on US Food and Drug Administration (FDA) drug labels at the time of approval. The new model uses more drugs and features for learning as well as a new algorithm. Comparator drugs sharing similar target activities to a drug of interest were evaluated by aggregating AEs from the FDA Adverse Event Reporting System (FAERS), FDA drug labels, and medical literature. An ensemble machine learning model was used to evaluate FAERS case count, disproportionality scores, percent of comparator drug labels with a specific AE, and percent of comparator drugs with the reports of the event in the literature. Overall classifier performance was F1 of 0.71, area under the precision‐recall curve of 0.78, and area under the receiver operating characteristic curve of 0.87. TAE analysis continues to show promise as a method to predict adverse events at the time of approval. |
format | Online Article Text |
id | pubmed-8246740 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-82467402021-07-09 Target Adverse Event Profiles for Predictive Safety in the Postmarket Setting Schotland, Peter Racz, Rebecca Jackson, David B. Soldatos, Theodoros G. Levin, Robert Strauss, David G. Burkhart, Keith Clin Pharmacol Ther Research We improved a previous pharmacological target adverse‐event (TAE) profile model to predict adverse events (AEs) on US Food and Drug Administration (FDA) drug labels at the time of approval. The new model uses more drugs and features for learning as well as a new algorithm. Comparator drugs sharing similar target activities to a drug of interest were evaluated by aggregating AEs from the FDA Adverse Event Reporting System (FAERS), FDA drug labels, and medical literature. An ensemble machine learning model was used to evaluate FAERS case count, disproportionality scores, percent of comparator drug labels with a specific AE, and percent of comparator drugs with the reports of the event in the literature. Overall classifier performance was F1 of 0.71, area under the precision‐recall curve of 0.78, and area under the receiver operating characteristic curve of 0.87. TAE analysis continues to show promise as a method to predict adverse events at the time of approval. John Wiley and Sons Inc. 2020-11-07 2021-05 /pmc/articles/PMC8246740/ /pubmed/33090463 http://dx.doi.org/10.1002/cpt.2074 Text en © 2020 Molecular Health GMBH. Clinical Pharmacology & Therapeutics published by Wiley Periodicals LLC on behalf of American Society for Clinical Pharmacology and Therapeutics. https://creativecommons.org/licenses/by-nc/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes. |
spellingShingle | Research Schotland, Peter Racz, Rebecca Jackson, David B. Soldatos, Theodoros G. Levin, Robert Strauss, David G. Burkhart, Keith Target Adverse Event Profiles for Predictive Safety in the Postmarket Setting |
title | Target Adverse Event Profiles for Predictive Safety in the Postmarket Setting |
title_full | Target Adverse Event Profiles for Predictive Safety in the Postmarket Setting |
title_fullStr | Target Adverse Event Profiles for Predictive Safety in the Postmarket Setting |
title_full_unstemmed | Target Adverse Event Profiles for Predictive Safety in the Postmarket Setting |
title_short | Target Adverse Event Profiles for Predictive Safety in the Postmarket Setting |
title_sort | target adverse event profiles for predictive safety in the postmarket setting |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8246740/ https://www.ncbi.nlm.nih.gov/pubmed/33090463 http://dx.doi.org/10.1002/cpt.2074 |
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