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Identify Function of WASL in Prognosis of Cervical Cancer Based on Omics Data
OBJECTIVE: To clarify the clinical relevance of WASP like actin nucleation promoting factor (WASL) in patients with cervical cancer and associated mechanisms. METHODS AND MATERIALS: We obtained high prediction accuracy and determined the correlation between the expression of WASL and the clinical ch...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8248809/ https://www.ncbi.nlm.nih.gov/pubmed/34222242 http://dx.doi.org/10.3389/fcell.2021.670890 |
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author | Hou, Jinxuan Chen, Chen Hu, Yingying Gong, Qing Gan, Lijuan Xu, Yu |
author_facet | Hou, Jinxuan Chen, Chen Hu, Yingying Gong, Qing Gan, Lijuan Xu, Yu |
author_sort | Hou, Jinxuan |
collection | PubMed |
description | OBJECTIVE: To clarify the clinical relevance of WASP like actin nucleation promoting factor (WASL) in patients with cervical cancer and associated mechanisms. METHODS AND MATERIALS: We obtained high prediction accuracy and determined the correlation between the expression of WASL and the clinical characteristics of cervical cancer patients. Differentially expressed genes (DEGs) were identified using microarray. Gene ontology (GO) enrichment analysis and gene set enrichment analysis (GSEA) were performed to determine potentially relevant mechanisms related to the prognostication ability of WASL expression. RESULTS: Chi-square test and multivariable logistic regression analysis suggested that lower expression of WASL was associated with lower pathological stage (chi-square test: p = 0.022, chi-square = 9.613; logistic regression: OR = 0.869, 95% CI: 0.756–0.991, p = 0.041). Patients in the WASL high expression group have worse overall survival (OS) [hazard ratio (HR): 0.555, 95% CI: 0.348–0.884, log-rank p = 0.012] and recurrence-free survival (RFS) (HR = 0.449, 95% CI: 0.215–0.934, log-rank p = 0.028) compared with those in the WASL low expression group. Univariate and multivariable Cox proportional hazards regression model suggested that WASL expression was an independent prognostic factor for predicting OS and RFS in cervical cancer. DEGs were mostly enriched GO terms related to DNA replication or the proliferation of tumor cells. The results of GSEA suggested samples in the WASL knockdown group were enriched in glycolysis, TNF-α signaling via NFkB, mTORC1 signaling, and Wnt/β-catenin signaling. CONCLUSIONS: WASL expression was associated with the pathological stage, and it might be an independent prognostication factor in patients with cervical cancer. Knockdown of WASL might be correlated with biological processes such as glycolysis, TNFα signaling, mTOR signaling, and Wnt/β-catenin signaling. |
format | Online Article Text |
id | pubmed-8248809 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-82488092021-07-02 Identify Function of WASL in Prognosis of Cervical Cancer Based on Omics Data Hou, Jinxuan Chen, Chen Hu, Yingying Gong, Qing Gan, Lijuan Xu, Yu Front Cell Dev Biol Cell and Developmental Biology OBJECTIVE: To clarify the clinical relevance of WASP like actin nucleation promoting factor (WASL) in patients with cervical cancer and associated mechanisms. METHODS AND MATERIALS: We obtained high prediction accuracy and determined the correlation between the expression of WASL and the clinical characteristics of cervical cancer patients. Differentially expressed genes (DEGs) were identified using microarray. Gene ontology (GO) enrichment analysis and gene set enrichment analysis (GSEA) were performed to determine potentially relevant mechanisms related to the prognostication ability of WASL expression. RESULTS: Chi-square test and multivariable logistic regression analysis suggested that lower expression of WASL was associated with lower pathological stage (chi-square test: p = 0.022, chi-square = 9.613; logistic regression: OR = 0.869, 95% CI: 0.756–0.991, p = 0.041). Patients in the WASL high expression group have worse overall survival (OS) [hazard ratio (HR): 0.555, 95% CI: 0.348–0.884, log-rank p = 0.012] and recurrence-free survival (RFS) (HR = 0.449, 95% CI: 0.215–0.934, log-rank p = 0.028) compared with those in the WASL low expression group. Univariate and multivariable Cox proportional hazards regression model suggested that WASL expression was an independent prognostic factor for predicting OS and RFS in cervical cancer. DEGs were mostly enriched GO terms related to DNA replication or the proliferation of tumor cells. The results of GSEA suggested samples in the WASL knockdown group were enriched in glycolysis, TNF-α signaling via NFkB, mTORC1 signaling, and Wnt/β-catenin signaling. CONCLUSIONS: WASL expression was associated with the pathological stage, and it might be an independent prognostication factor in patients with cervical cancer. Knockdown of WASL might be correlated with biological processes such as glycolysis, TNFα signaling, mTOR signaling, and Wnt/β-catenin signaling. Frontiers Media S.A. 2021-06-08 /pmc/articles/PMC8248809/ /pubmed/34222242 http://dx.doi.org/10.3389/fcell.2021.670890 Text en Copyright © 2021 Hou, Chen, Hu, Gong, Gan and Xu. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Cell and Developmental Biology Hou, Jinxuan Chen, Chen Hu, Yingying Gong, Qing Gan, Lijuan Xu, Yu Identify Function of WASL in Prognosis of Cervical Cancer Based on Omics Data |
title | Identify Function of WASL in Prognosis of Cervical Cancer Based on Omics Data |
title_full | Identify Function of WASL in Prognosis of Cervical Cancer Based on Omics Data |
title_fullStr | Identify Function of WASL in Prognosis of Cervical Cancer Based on Omics Data |
title_full_unstemmed | Identify Function of WASL in Prognosis of Cervical Cancer Based on Omics Data |
title_short | Identify Function of WASL in Prognosis of Cervical Cancer Based on Omics Data |
title_sort | identify function of wasl in prognosis of cervical cancer based on omics data |
topic | Cell and Developmental Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8248809/ https://www.ncbi.nlm.nih.gov/pubmed/34222242 http://dx.doi.org/10.3389/fcell.2021.670890 |
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