StemLoop-Finder: a Tool for the Detection of DNA Hairpins with Conserved Motifs

Nucleic acid secondary structures play important roles in regulating biological processes. StemLoop-Finder is a computational tool to recognize and annotate conserved structural motifs in large data sets. The program is optimized for the detection of stem-loop structures that may serve as origins of...

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Detalles Bibliográficos
Autores principales: Pratt, Alyssa A., Torrance, Ellis L., Kasun, George W., Stedman, Kenneth M., de la Higuera, Ignacio
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2021
Materias:
Databases and Software
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8248882/
https://www.ncbi.nlm.nih.gov/pubmed/34197205
http://dx.doi.org/10.1128/MRA.00424-21
Descripción
Sumario:Nucleic acid secondary structures play important roles in regulating biological processes. StemLoop-Finder is a computational tool to recognize and annotate conserved structural motifs in large data sets. The program is optimized for the detection of stem-loop structures that may serve as origins of replication in circular replication-associated protein (Rep)-encoding single-stranded (CRESS) DNA viruses.

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