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Improved design and analysis of practical minimizers

MOTIVATION: Minimizers are methods to sample k-mers from a string, with the guarantee that similar set of k-mers will be chosen on similar strings. It is parameterized by the k-mer length k, a window length w and an order on the k-mers. Minimizers are used in a large number of softwares and pipeline...

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Detalles Bibliográficos
Autores principales: Zheng, Hongyu, Kingsford, Carl, Marçais, Guillaume
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8248892/
https://www.ncbi.nlm.nih.gov/pubmed/32657376
http://dx.doi.org/10.1093/bioinformatics/btaa472