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Determination of k-mer density in a DNA sequence and subsequent cluster formation algorithm based on the application of electronic filter
We describe a novel algorithm for information recovery from DNA sequences by using a digital filter. This work proposes a three-part algorithm to decide the k-mer or q-gram word density. Employing a finite impulse response digital filter, one can calculate the sequence's k-mer or q-gram word de...
| Autores principales: | , , , , , |
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| Formato: | Online Artículo Texto |
| Lenguaje: | English |
| Publicado: |
Nature Publishing Group UK
2021
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| Materias: | |
| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8249421/ https://www.ncbi.nlm.nih.gov/pubmed/34211040 http://dx.doi.org/10.1038/s41598-021-93154-3 |