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Development and validation of resource-driven risk prediction models for incident chronic kidney disease in type 2 diabetes
Prediction models for population-based screening need, for global usage, to be resource-driven, involving predictors that are affordably resourced. Here, we report the development and validation of three resource-driven risk models to identify people with type 2 diabetes (T2DM) at risk of stage 3 CK...
Autores principales: | , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8249456/ https://www.ncbi.nlm.nih.gov/pubmed/34211028 http://dx.doi.org/10.1038/s41598-021-93096-w |
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author | Gurudas, Sarega Nugawela, Manjula Prevost, A. Toby Sathish, Thirunavukkarasu Mathur, Rohini Rafferty, J. M. Blighe, Kevin Rajalakshmi, Ramachandran Mohan, Anjana R. Saravanan, Jebarani Majeed, Azeem Mohan, Viswanthan Owens, David R. Robson, John Sivaprasad, Sobha |
author_facet | Gurudas, Sarega Nugawela, Manjula Prevost, A. Toby Sathish, Thirunavukkarasu Mathur, Rohini Rafferty, J. M. Blighe, Kevin Rajalakshmi, Ramachandran Mohan, Anjana R. Saravanan, Jebarani Majeed, Azeem Mohan, Viswanthan Owens, David R. Robson, John Sivaprasad, Sobha |
author_sort | Gurudas, Sarega |
collection | PubMed |
description | Prediction models for population-based screening need, for global usage, to be resource-driven, involving predictors that are affordably resourced. Here, we report the development and validation of three resource-driven risk models to identify people with type 2 diabetes (T2DM) at risk of stage 3 CKD defined by a decline in estimated glomerular filtration rate (eGFR) to below 60 mL/min/1.73m(2). The observational study cohort used for model development consisted of data from a primary care dataset of 20,510 multi-ethnic individuals with T2DM from London, UK (2007–2018). Discrimination and calibration of the resulting prediction models developed using cox regression were assessed using the c-statistic and calibration slope, respectively. Models were internally validated using tenfold cross-validation and externally validated on 13,346 primary care individuals from Wales, UK. The simplest model was simplified into a risk score to enable implementation in community-based medicine. The derived full model included demographic, laboratory parameters, medication-use, cardiovascular disease history (CVD) and sight threatening retinopathy status (STDR). Two less resource-intense models were developed by excluding CVD and STDR in the second model and HbA1c and HDL in the third model. All three 5-year risk models had good internal discrimination and calibration (optimism adjusted C-statistics were each 0.85 and calibration slopes 0.999–1.002). In Wales, models achieved excellent discrimination(c-statistics ranged 0.82–0.83). Calibration slopes at 5-years suggested models over-predicted risks, however were successfully updated to accommodate reduced incidence of stage 3 CKD in Wales, which improved their alignment with the observed rates in Wales (E/O ratios near to 1). The risk score demonstrated similar model performance compared to direct evaluation of the cox model. These resource-driven risk prediction models may enable universal screening for Stage 3 CKD to enable targeted early optimisation of risk factors for CKD. |
format | Online Article Text |
id | pubmed-8249456 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-82494562021-07-06 Development and validation of resource-driven risk prediction models for incident chronic kidney disease in type 2 diabetes Gurudas, Sarega Nugawela, Manjula Prevost, A. Toby Sathish, Thirunavukkarasu Mathur, Rohini Rafferty, J. M. Blighe, Kevin Rajalakshmi, Ramachandran Mohan, Anjana R. Saravanan, Jebarani Majeed, Azeem Mohan, Viswanthan Owens, David R. Robson, John Sivaprasad, Sobha Sci Rep Article Prediction models for population-based screening need, for global usage, to be resource-driven, involving predictors that are affordably resourced. Here, we report the development and validation of three resource-driven risk models to identify people with type 2 diabetes (T2DM) at risk of stage 3 CKD defined by a decline in estimated glomerular filtration rate (eGFR) to below 60 mL/min/1.73m(2). The observational study cohort used for model development consisted of data from a primary care dataset of 20,510 multi-ethnic individuals with T2DM from London, UK (2007–2018). Discrimination and calibration of the resulting prediction models developed using cox regression were assessed using the c-statistic and calibration slope, respectively. Models were internally validated using tenfold cross-validation and externally validated on 13,346 primary care individuals from Wales, UK. The simplest model was simplified into a risk score to enable implementation in community-based medicine. The derived full model included demographic, laboratory parameters, medication-use, cardiovascular disease history (CVD) and sight threatening retinopathy status (STDR). Two less resource-intense models were developed by excluding CVD and STDR in the second model and HbA1c and HDL in the third model. All three 5-year risk models had good internal discrimination and calibration (optimism adjusted C-statistics were each 0.85 and calibration slopes 0.999–1.002). In Wales, models achieved excellent discrimination(c-statistics ranged 0.82–0.83). Calibration slopes at 5-years suggested models over-predicted risks, however were successfully updated to accommodate reduced incidence of stage 3 CKD in Wales, which improved their alignment with the observed rates in Wales (E/O ratios near to 1). The risk score demonstrated similar model performance compared to direct evaluation of the cox model. These resource-driven risk prediction models may enable universal screening for Stage 3 CKD to enable targeted early optimisation of risk factors for CKD. Nature Publishing Group UK 2021-07-01 /pmc/articles/PMC8249456/ /pubmed/34211028 http://dx.doi.org/10.1038/s41598-021-93096-w Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Gurudas, Sarega Nugawela, Manjula Prevost, A. Toby Sathish, Thirunavukkarasu Mathur, Rohini Rafferty, J. M. Blighe, Kevin Rajalakshmi, Ramachandran Mohan, Anjana R. Saravanan, Jebarani Majeed, Azeem Mohan, Viswanthan Owens, David R. Robson, John Sivaprasad, Sobha Development and validation of resource-driven risk prediction models for incident chronic kidney disease in type 2 diabetes |
title | Development and validation of resource-driven risk prediction models for incident chronic kidney disease in type 2 diabetes |
title_full | Development and validation of resource-driven risk prediction models for incident chronic kidney disease in type 2 diabetes |
title_fullStr | Development and validation of resource-driven risk prediction models for incident chronic kidney disease in type 2 diabetes |
title_full_unstemmed | Development and validation of resource-driven risk prediction models for incident chronic kidney disease in type 2 diabetes |
title_short | Development and validation of resource-driven risk prediction models for incident chronic kidney disease in type 2 diabetes |
title_sort | development and validation of resource-driven risk prediction models for incident chronic kidney disease in type 2 diabetes |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8249456/ https://www.ncbi.nlm.nih.gov/pubmed/34211028 http://dx.doi.org/10.1038/s41598-021-93096-w |
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