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Diagnostic Value of the Fimbriae Distribution Pattern in Localization of Urinary Tract Infection

Urinary tract infections (UTIs) are one of the most common infectious diseases. UTIs are mainly caused by uropathogenic Escherichia coli (UPEC), and are either upper or lower according to the infection site. Fimbriae are necessary for UPEC to adhere to the host uroepithelium, and are abundant and di...

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Autores principales: Li, Xiao, Zhou, Kaichen, Wang, Jingyu, Guo, Jiahe, Cao, Yang, Ren, Jie, Guan, Tao, Sheng, Wenchao, Zhang, Mingyao, Yao, Zhi, Wang, Quan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8249706/
https://www.ncbi.nlm.nih.gov/pubmed/34222269
http://dx.doi.org/10.3389/fmed.2021.602691
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author Li, Xiao
Zhou, Kaichen
Wang, Jingyu
Guo, Jiahe
Cao, Yang
Ren, Jie
Guan, Tao
Sheng, Wenchao
Zhang, Mingyao
Yao, Zhi
Wang, Quan
author_facet Li, Xiao
Zhou, Kaichen
Wang, Jingyu
Guo, Jiahe
Cao, Yang
Ren, Jie
Guan, Tao
Sheng, Wenchao
Zhang, Mingyao
Yao, Zhi
Wang, Quan
author_sort Li, Xiao
collection PubMed
description Urinary tract infections (UTIs) are one of the most common infectious diseases. UTIs are mainly caused by uropathogenic Escherichia coli (UPEC), and are either upper or lower according to the infection site. Fimbriae are necessary for UPEC to adhere to the host uroepithelium, and are abundant and diverse in UPEC strains. Although great progress has been made in determining the roles of different types of fimbriae in UPEC colonization, the contributions of multiple fimbriae to site-specific attachment also need to be considered. Therefore, the distribution patterns of 22 fimbrial genes in 90 UPEC strains from patients diagnosed with upper or lower UTIs were analyzed using PCR. The distribution patterns correlated with the infection sites, an XGBoost model with a mean accuracy of 83.33% and a mean area under the curve (AUC) of the receiver operating characteristic (ROC) of 0.92 demonstrated that fimbrial gene distribution patterns could predict the localization of upper and lower UTIs.
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spelling pubmed-82497062021-07-03 Diagnostic Value of the Fimbriae Distribution Pattern in Localization of Urinary Tract Infection Li, Xiao Zhou, Kaichen Wang, Jingyu Guo, Jiahe Cao, Yang Ren, Jie Guan, Tao Sheng, Wenchao Zhang, Mingyao Yao, Zhi Wang, Quan Front Med (Lausanne) Medicine Urinary tract infections (UTIs) are one of the most common infectious diseases. UTIs are mainly caused by uropathogenic Escherichia coli (UPEC), and are either upper or lower according to the infection site. Fimbriae are necessary for UPEC to adhere to the host uroepithelium, and are abundant and diverse in UPEC strains. Although great progress has been made in determining the roles of different types of fimbriae in UPEC colonization, the contributions of multiple fimbriae to site-specific attachment also need to be considered. Therefore, the distribution patterns of 22 fimbrial genes in 90 UPEC strains from patients diagnosed with upper or lower UTIs were analyzed using PCR. The distribution patterns correlated with the infection sites, an XGBoost model with a mean accuracy of 83.33% and a mean area under the curve (AUC) of the receiver operating characteristic (ROC) of 0.92 demonstrated that fimbrial gene distribution patterns could predict the localization of upper and lower UTIs. Frontiers Media S.A. 2021-06-18 /pmc/articles/PMC8249706/ /pubmed/34222269 http://dx.doi.org/10.3389/fmed.2021.602691 Text en Copyright © 2021 Li, Zhou, Wang, Guo, Cao, Ren, Guan, Sheng, Zhang, Yao and Wang. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Medicine
Li, Xiao
Zhou, Kaichen
Wang, Jingyu
Guo, Jiahe
Cao, Yang
Ren, Jie
Guan, Tao
Sheng, Wenchao
Zhang, Mingyao
Yao, Zhi
Wang, Quan
Diagnostic Value of the Fimbriae Distribution Pattern in Localization of Urinary Tract Infection
title Diagnostic Value of the Fimbriae Distribution Pattern in Localization of Urinary Tract Infection
title_full Diagnostic Value of the Fimbriae Distribution Pattern in Localization of Urinary Tract Infection
title_fullStr Diagnostic Value of the Fimbriae Distribution Pattern in Localization of Urinary Tract Infection
title_full_unstemmed Diagnostic Value of the Fimbriae Distribution Pattern in Localization of Urinary Tract Infection
title_short Diagnostic Value of the Fimbriae Distribution Pattern in Localization of Urinary Tract Infection
title_sort diagnostic value of the fimbriae distribution pattern in localization of urinary tract infection
topic Medicine
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8249706/
https://www.ncbi.nlm.nih.gov/pubmed/34222269
http://dx.doi.org/10.3389/fmed.2021.602691
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