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Key Intrinsic Connectivity Networks for Individual Identification With Siamese Long Short-Term Memory

In functional magnetic resonance imaging (fMRI) analysis, many studies have been conducted on inter-subject variability as well as intra-subject reproducibility. These studies indicate that fMRI could have unique characteristics for individuals. In this study, we hypothesized that the dynamic inform...

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Autores principales: Park, Yeong-Hun, Shin, Seong A., Kim, Seonggyu, Lee, Jong-Min
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8249867/
https://www.ncbi.nlm.nih.gov/pubmed/34220422
http://dx.doi.org/10.3389/fnins.2021.660187
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author Park, Yeong-Hun
Shin, Seong A.
Kim, Seonggyu
Lee, Jong-Min
author_facet Park, Yeong-Hun
Shin, Seong A.
Kim, Seonggyu
Lee, Jong-Min
author_sort Park, Yeong-Hun
collection PubMed
description In functional magnetic resonance imaging (fMRI) analysis, many studies have been conducted on inter-subject variability as well as intra-subject reproducibility. These studies indicate that fMRI could have unique characteristics for individuals. In this study, we hypothesized that the dynamic information during 1 min of fMRI was unique and repetitive enough for each subject, so we applied long short-term memory (LSTM) using initial time points of dynamic resting-state fMRI for individual identification. Siamese network is used to obtain robust individual identification performance without additional learning on a new dataset. In particular, by adding a new structure called region of interest–wise average pooling (RAP), individual identification performance could be improved, and key intrinsic connectivity networks (ICNs) for individual identification were also identified. The average performance of individual identification was 97.88% using the test dataset in eightfold cross-validation analysis. Through the visualization of features learned by Siamese LSTM with RAP, ICNs spanning the parietal region were observed as the key ICNs in identifying individuals. These results suggest the key ICNs in fMRI could represent individual uniqueness.
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spelling pubmed-82498672021-07-03 Key Intrinsic Connectivity Networks for Individual Identification With Siamese Long Short-Term Memory Park, Yeong-Hun Shin, Seong A. Kim, Seonggyu Lee, Jong-Min Front Neurosci Neuroscience In functional magnetic resonance imaging (fMRI) analysis, many studies have been conducted on inter-subject variability as well as intra-subject reproducibility. These studies indicate that fMRI could have unique characteristics for individuals. In this study, we hypothesized that the dynamic information during 1 min of fMRI was unique and repetitive enough for each subject, so we applied long short-term memory (LSTM) using initial time points of dynamic resting-state fMRI for individual identification. Siamese network is used to obtain robust individual identification performance without additional learning on a new dataset. In particular, by adding a new structure called region of interest–wise average pooling (RAP), individual identification performance could be improved, and key intrinsic connectivity networks (ICNs) for individual identification were also identified. The average performance of individual identification was 97.88% using the test dataset in eightfold cross-validation analysis. Through the visualization of features learned by Siamese LSTM with RAP, ICNs spanning the parietal region were observed as the key ICNs in identifying individuals. These results suggest the key ICNs in fMRI could represent individual uniqueness. Frontiers Media S.A. 2021-06-18 /pmc/articles/PMC8249867/ /pubmed/34220422 http://dx.doi.org/10.3389/fnins.2021.660187 Text en Copyright © 2021 Park, Shin, Kim and Lee. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Neuroscience
Park, Yeong-Hun
Shin, Seong A.
Kim, Seonggyu
Lee, Jong-Min
Key Intrinsic Connectivity Networks for Individual Identification With Siamese Long Short-Term Memory
title Key Intrinsic Connectivity Networks for Individual Identification With Siamese Long Short-Term Memory
title_full Key Intrinsic Connectivity Networks for Individual Identification With Siamese Long Short-Term Memory
title_fullStr Key Intrinsic Connectivity Networks for Individual Identification With Siamese Long Short-Term Memory
title_full_unstemmed Key Intrinsic Connectivity Networks for Individual Identification With Siamese Long Short-Term Memory
title_short Key Intrinsic Connectivity Networks for Individual Identification With Siamese Long Short-Term Memory
title_sort key intrinsic connectivity networks for individual identification with siamese long short-term memory
topic Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8249867/
https://www.ncbi.nlm.nih.gov/pubmed/34220422
http://dx.doi.org/10.3389/fnins.2021.660187
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