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Machine learning discovery of distinguishing laboratory features for severity classification of COVID‐19 patients

The exponential spread of COVID‐19 worldwide is evident, with devastating outbreaks primarily in the United States, Spain, Italy, the United Kingdom, France, Germany, Turkey and Russia. As of 1 May 2020, a total of 3,308,386 confirmed cases have been reported worldwide, with an accumulative mortalit...

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Autores principales: Xiao, Yang, Yan, Li, Zhang, Mingyang, Pinkerton, Kent E., Cao, Haosen, Xiao, Ying, Li, Wei, Li, Shuai, Wang, Yancheng, Li, Shusheng, Cao, Zhiguo, Wong, Gary Wing‐Kin, Xu, Hui, Zhang, Hai‐Tao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8251458/
http://dx.doi.org/10.1049/csy2.12005
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author Xiao, Yang
Yan, Li
Zhang, Mingyang
Pinkerton, Kent E.
Cao, Haosen
Xiao, Ying
Li, Wei
Li, Shuai
Wang, Yancheng
Li, Shusheng
Cao, Zhiguo
Wong, Gary Wing‐Kin
Xu, Hui
Zhang, Hai‐Tao
author_facet Xiao, Yang
Yan, Li
Zhang, Mingyang
Pinkerton, Kent E.
Cao, Haosen
Xiao, Ying
Li, Wei
Li, Shuai
Wang, Yancheng
Li, Shusheng
Cao, Zhiguo
Wong, Gary Wing‐Kin
Xu, Hui
Zhang, Hai‐Tao
author_sort Xiao, Yang
collection PubMed
description The exponential spread of COVID‐19 worldwide is evident, with devastating outbreaks primarily in the United States, Spain, Italy, the United Kingdom, France, Germany, Turkey and Russia. As of 1 May 2020, a total of 3,308,386 confirmed cases have been reported worldwide, with an accumulative mortality of 233,093. Due to the complexity and uncertainty of the pathology of COVID‐19, it is not easy for front‐line doctors to categorise severity levels of clinical COVID‐19 that are general and severe/critical cases, with consistency. The more than 300 laboratory features, coupled with underlying disease, all combine to complicate proper and rapid patient diagnosis. However, such screening is necessary for early triage, diagnosis, assignment of appropriate level of care facility, and institution of timely intervention. A machine learning analysis was carried out with confirmed COVID‐19 patient data from 10 January to 18 February 2020, who were admitted to Tongji Hospital, in Wuhan, China. A softmax neural network‐based machine learning model was established to categorise patient severity levels. According to the analysis of 2662 cases using clinical and laboratory data, the present model can be used to reveal the top 30 of more than 300 laboratory features, yielding 86.30% blind test accuracy, 0.8195 F1‐score, and 100% consistency using a two‐way patient classification of severe/critical to general. For severe/critical cases, F1‐score is 0.9081 (i.e. recall is 0.9050, and precision is 0.9113). This model for classification can be accomplished at a mini‐second‐level computational cost (in contrast to minute‐level manual). Based on available COVID‐19 patient diagnosis and therapy, an artificial intelligence model paradigm can help doctors quickly classify patients with a high degree of accuracy and 100% consistency to significantly improve diagnostic and classification efficiency. The discovered top 30 laboratory features can be used for greater differentiation to serve as an essential supplement to current guidelines, thus creating a more comprehensive assessment of COVID‐19 cases during the early stages of infection. Such early differentiation will help the assignment of the appropriate level of care for individual patients.
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spelling pubmed-82514582021-07-02 Machine learning discovery of distinguishing laboratory features for severity classification of COVID‐19 patients Xiao, Yang Yan, Li Zhang, Mingyang Pinkerton, Kent E. Cao, Haosen Xiao, Ying Li, Wei Li, Shuai Wang, Yancheng Li, Shusheng Cao, Zhiguo Wong, Gary Wing‐Kin Xu, Hui Zhang, Hai‐Tao IET Cyber‐Systems and Robotics Original Research Papers The exponential spread of COVID‐19 worldwide is evident, with devastating outbreaks primarily in the United States, Spain, Italy, the United Kingdom, France, Germany, Turkey and Russia. As of 1 May 2020, a total of 3,308,386 confirmed cases have been reported worldwide, with an accumulative mortality of 233,093. Due to the complexity and uncertainty of the pathology of COVID‐19, it is not easy for front‐line doctors to categorise severity levels of clinical COVID‐19 that are general and severe/critical cases, with consistency. The more than 300 laboratory features, coupled with underlying disease, all combine to complicate proper and rapid patient diagnosis. However, such screening is necessary for early triage, diagnosis, assignment of appropriate level of care facility, and institution of timely intervention. A machine learning analysis was carried out with confirmed COVID‐19 patient data from 10 January to 18 February 2020, who were admitted to Tongji Hospital, in Wuhan, China. A softmax neural network‐based machine learning model was established to categorise patient severity levels. According to the analysis of 2662 cases using clinical and laboratory data, the present model can be used to reveal the top 30 of more than 300 laboratory features, yielding 86.30% blind test accuracy, 0.8195 F1‐score, and 100% consistency using a two‐way patient classification of severe/critical to general. For severe/critical cases, F1‐score is 0.9081 (i.e. recall is 0.9050, and precision is 0.9113). This model for classification can be accomplished at a mini‐second‐level computational cost (in contrast to minute‐level manual). Based on available COVID‐19 patient diagnosis and therapy, an artificial intelligence model paradigm can help doctors quickly classify patients with a high degree of accuracy and 100% consistency to significantly improve diagnostic and classification efficiency. The discovered top 30 laboratory features can be used for greater differentiation to serve as an essential supplement to current guidelines, thus creating a more comprehensive assessment of COVID‐19 cases during the early stages of infection. Such early differentiation will help the assignment of the appropriate level of care for individual patients. John Wiley and Sons Inc. 2021-03-22 2021-03 /pmc/articles/PMC8251458/ http://dx.doi.org/10.1049/csy2.12005 Text en © 2021 The Authors. IET Cyber‐systems and Robotics published by John Wiley & Sons Ltd on behalf of The Institution of Engineering and Technology and Zhejiang University Press. https://creativecommons.org/licenses/by-nc/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.
spellingShingle Original Research Papers
Xiao, Yang
Yan, Li
Zhang, Mingyang
Pinkerton, Kent E.
Cao, Haosen
Xiao, Ying
Li, Wei
Li, Shuai
Wang, Yancheng
Li, Shusheng
Cao, Zhiguo
Wong, Gary Wing‐Kin
Xu, Hui
Zhang, Hai‐Tao
Machine learning discovery of distinguishing laboratory features for severity classification of COVID‐19 patients
title Machine learning discovery of distinguishing laboratory features for severity classification of COVID‐19 patients
title_full Machine learning discovery of distinguishing laboratory features for severity classification of COVID‐19 patients
title_fullStr Machine learning discovery of distinguishing laboratory features for severity classification of COVID‐19 patients
title_full_unstemmed Machine learning discovery of distinguishing laboratory features for severity classification of COVID‐19 patients
title_short Machine learning discovery of distinguishing laboratory features for severity classification of COVID‐19 patients
title_sort machine learning discovery of distinguishing laboratory features for severity classification of covid‐19 patients
topic Original Research Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8251458/
http://dx.doi.org/10.1049/csy2.12005
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