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Tuning the Transglycosylation Reaction of a GH11 Xylanase by a Delicate Enhancement of its Thumb Flexibility
Glycoside hydrolases (GHs) are attractive tools for multiple biotechnological applications. In conjunction with their hydrolytic function, GHs can perform transglycosylation under specific conditions. In nature, oligosaccharide synthesis is performed by glycosyltransferases (GTs); however, the indus...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8251542/ https://www.ncbi.nlm.nih.gov/pubmed/33534182 http://dx.doi.org/10.1002/cbic.202000856 |
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author | Marneth, Kim van den Elst, Hans Cramer‐Blok, Anneloes Codee, Jeroen Overkleeft, Hermen S. Aerts, Johannes M. F. G. Ubbink, Marcellus Ben Bdira, Fredj |
author_facet | Marneth, Kim van den Elst, Hans Cramer‐Blok, Anneloes Codee, Jeroen Overkleeft, Hermen S. Aerts, Johannes M. F. G. Ubbink, Marcellus Ben Bdira, Fredj |
author_sort | Marneth, Kim |
collection | PubMed |
description | Glycoside hydrolases (GHs) are attractive tools for multiple biotechnological applications. In conjunction with their hydrolytic function, GHs can perform transglycosylation under specific conditions. In nature, oligosaccharide synthesis is performed by glycosyltransferases (GTs); however, the industrial use of GTs is limited by their instability in solution. A key difference between GTs and GHs is the flexibility of their binding site architecture. We have used the xylanase from Bacillus circulans (BCX) to study the interplay between active‐site flexibility and transglycosylation. Residues of the BCX “thumb” were substituted to increase the flexibility of the enzyme binding site. Replacement of the highly conserved residue P116 with glycine shifted the balance of the BCX enzymatic reaction toward transglycosylation. The effects of this point mutation on the structure and dynamics of BCX were investigated by NMR spectroscopy. The P116G mutation induces subtle changes in the configuration of the thumb and enhances the millisecond dynamics of the active site. Based on our findings, we propose the remodelling of the GH enzymes glycon site flexibility as a strategy to improve the transglycosylation efficiency of these biotechnologically important catalysts. |
format | Online Article Text |
id | pubmed-8251542 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-82515422021-07-06 Tuning the Transglycosylation Reaction of a GH11 Xylanase by a Delicate Enhancement of its Thumb Flexibility Marneth, Kim van den Elst, Hans Cramer‐Blok, Anneloes Codee, Jeroen Overkleeft, Hermen S. Aerts, Johannes M. F. G. Ubbink, Marcellus Ben Bdira, Fredj Chembiochem Communications Glycoside hydrolases (GHs) are attractive tools for multiple biotechnological applications. In conjunction with their hydrolytic function, GHs can perform transglycosylation under specific conditions. In nature, oligosaccharide synthesis is performed by glycosyltransferases (GTs); however, the industrial use of GTs is limited by their instability in solution. A key difference between GTs and GHs is the flexibility of their binding site architecture. We have used the xylanase from Bacillus circulans (BCX) to study the interplay between active‐site flexibility and transglycosylation. Residues of the BCX “thumb” were substituted to increase the flexibility of the enzyme binding site. Replacement of the highly conserved residue P116 with glycine shifted the balance of the BCX enzymatic reaction toward transglycosylation. The effects of this point mutation on the structure and dynamics of BCX were investigated by NMR spectroscopy. The P116G mutation induces subtle changes in the configuration of the thumb and enhances the millisecond dynamics of the active site. Based on our findings, we propose the remodelling of the GH enzymes glycon site flexibility as a strategy to improve the transglycosylation efficiency of these biotechnologically important catalysts. John Wiley and Sons Inc. 2021-03-16 2021-05-14 /pmc/articles/PMC8251542/ /pubmed/33534182 http://dx.doi.org/10.1002/cbic.202000856 Text en © 2021 The Authors. ChemBioChem published by Wiley-VCH GmbH https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made. |
spellingShingle | Communications Marneth, Kim van den Elst, Hans Cramer‐Blok, Anneloes Codee, Jeroen Overkleeft, Hermen S. Aerts, Johannes M. F. G. Ubbink, Marcellus Ben Bdira, Fredj Tuning the Transglycosylation Reaction of a GH11 Xylanase by a Delicate Enhancement of its Thumb Flexibility |
title | Tuning the Transglycosylation Reaction of a GH11 Xylanase by a Delicate Enhancement of its Thumb Flexibility |
title_full | Tuning the Transglycosylation Reaction of a GH11 Xylanase by a Delicate Enhancement of its Thumb Flexibility |
title_fullStr | Tuning the Transglycosylation Reaction of a GH11 Xylanase by a Delicate Enhancement of its Thumb Flexibility |
title_full_unstemmed | Tuning the Transglycosylation Reaction of a GH11 Xylanase by a Delicate Enhancement of its Thumb Flexibility |
title_short | Tuning the Transglycosylation Reaction of a GH11 Xylanase by a Delicate Enhancement of its Thumb Flexibility |
title_sort | tuning the transglycosylation reaction of a gh11 xylanase by a delicate enhancement of its thumb flexibility |
topic | Communications |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8251542/ https://www.ncbi.nlm.nih.gov/pubmed/33534182 http://dx.doi.org/10.1002/cbic.202000856 |
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