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Tuning the Transglycosylation Reaction of a GH11 Xylanase by a Delicate Enhancement of its Thumb Flexibility

Glycoside hydrolases (GHs) are attractive tools for multiple biotechnological applications. In conjunction with their hydrolytic function, GHs can perform transglycosylation under specific conditions. In nature, oligosaccharide synthesis is performed by glycosyltransferases (GTs); however, the indus...

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Autores principales: Marneth, Kim, van den Elst, Hans, Cramer‐Blok, Anneloes, Codee, Jeroen, Overkleeft, Hermen S., Aerts, Johannes M. F. G., Ubbink, Marcellus, Ben Bdira, Fredj
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8251542/
https://www.ncbi.nlm.nih.gov/pubmed/33534182
http://dx.doi.org/10.1002/cbic.202000856
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author Marneth, Kim
van den Elst, Hans
Cramer‐Blok, Anneloes
Codee, Jeroen
Overkleeft, Hermen S.
Aerts, Johannes M. F. G.
Ubbink, Marcellus
Ben Bdira, Fredj
author_facet Marneth, Kim
van den Elst, Hans
Cramer‐Blok, Anneloes
Codee, Jeroen
Overkleeft, Hermen S.
Aerts, Johannes M. F. G.
Ubbink, Marcellus
Ben Bdira, Fredj
author_sort Marneth, Kim
collection PubMed
description Glycoside hydrolases (GHs) are attractive tools for multiple biotechnological applications. In conjunction with their hydrolytic function, GHs can perform transglycosylation under specific conditions. In nature, oligosaccharide synthesis is performed by glycosyltransferases (GTs); however, the industrial use of GTs is limited by their instability in solution. A key difference between GTs and GHs is the flexibility of their binding site architecture. We have used the xylanase from Bacillus circulans (BCX) to study the interplay between active‐site flexibility and transglycosylation. Residues of the BCX “thumb” were substituted to increase the flexibility of the enzyme binding site. Replacement of the highly conserved residue P116 with glycine shifted the balance of the BCX enzymatic reaction toward transglycosylation. The effects of this point mutation on the structure and dynamics of BCX were investigated by NMR spectroscopy. The P116G mutation induces subtle changes in the configuration of the thumb and enhances the millisecond dynamics of the active site. Based on our findings, we propose the remodelling of the GH enzymes glycon site flexibility as a strategy to improve the transglycosylation efficiency of these biotechnologically important catalysts.
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spelling pubmed-82515422021-07-06 Tuning the Transglycosylation Reaction of a GH11 Xylanase by a Delicate Enhancement of its Thumb Flexibility Marneth, Kim van den Elst, Hans Cramer‐Blok, Anneloes Codee, Jeroen Overkleeft, Hermen S. Aerts, Johannes M. F. G. Ubbink, Marcellus Ben Bdira, Fredj Chembiochem Communications Glycoside hydrolases (GHs) are attractive tools for multiple biotechnological applications. In conjunction with their hydrolytic function, GHs can perform transglycosylation under specific conditions. In nature, oligosaccharide synthesis is performed by glycosyltransferases (GTs); however, the industrial use of GTs is limited by their instability in solution. A key difference between GTs and GHs is the flexibility of their binding site architecture. We have used the xylanase from Bacillus circulans (BCX) to study the interplay between active‐site flexibility and transglycosylation. Residues of the BCX “thumb” were substituted to increase the flexibility of the enzyme binding site. Replacement of the highly conserved residue P116 with glycine shifted the balance of the BCX enzymatic reaction toward transglycosylation. The effects of this point mutation on the structure and dynamics of BCX were investigated by NMR spectroscopy. The P116G mutation induces subtle changes in the configuration of the thumb and enhances the millisecond dynamics of the active site. Based on our findings, we propose the remodelling of the GH enzymes glycon site flexibility as a strategy to improve the transglycosylation efficiency of these biotechnologically important catalysts. John Wiley and Sons Inc. 2021-03-16 2021-05-14 /pmc/articles/PMC8251542/ /pubmed/33534182 http://dx.doi.org/10.1002/cbic.202000856 Text en © 2021 The Authors. ChemBioChem published by Wiley-VCH GmbH https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.
spellingShingle Communications
Marneth, Kim
van den Elst, Hans
Cramer‐Blok, Anneloes
Codee, Jeroen
Overkleeft, Hermen S.
Aerts, Johannes M. F. G.
Ubbink, Marcellus
Ben Bdira, Fredj
Tuning the Transglycosylation Reaction of a GH11 Xylanase by a Delicate Enhancement of its Thumb Flexibility
title Tuning the Transglycosylation Reaction of a GH11 Xylanase by a Delicate Enhancement of its Thumb Flexibility
title_full Tuning the Transglycosylation Reaction of a GH11 Xylanase by a Delicate Enhancement of its Thumb Flexibility
title_fullStr Tuning the Transglycosylation Reaction of a GH11 Xylanase by a Delicate Enhancement of its Thumb Flexibility
title_full_unstemmed Tuning the Transglycosylation Reaction of a GH11 Xylanase by a Delicate Enhancement of its Thumb Flexibility
title_short Tuning the Transglycosylation Reaction of a GH11 Xylanase by a Delicate Enhancement of its Thumb Flexibility
title_sort tuning the transglycosylation reaction of a gh11 xylanase by a delicate enhancement of its thumb flexibility
topic Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8251542/
https://www.ncbi.nlm.nih.gov/pubmed/33534182
http://dx.doi.org/10.1002/cbic.202000856
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